| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4366918 = | 14 (0.750) | 4 (0.220) | 4/234 | NT | 22.7% | intergenic (‑140/+40) | PP_3843/PP_3844 | hypothetical protein/D‑aminopeptidase |
| ? | NC_002947 | 4366948 = | 14 (0.780) | intergenic (‑170/+10) | PP_3843/PP_3844 | hypothetical protein/D‑aminopeptidase | |||||
TTGTAGTCAGGTGGTTTATTGCCACCATAGCGAACGTGCAGTTTTACGCAAATTCGTCTGACTCATCTGTGAGCTGAATCGGACAATCGGCTATTCAGCAGCCCCGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTCGGCGGTGTCAGCGGCTAGTAAGGCGTTGATGATGGCTTCTTCCA > NC_002947/4366800‑4367094 | ttGTAGTCAGGTGGTTTATTGACACCATAGCGAACGTGCAGTGTTACGCAAATTCTTCTGACTCATCTGTGAGCTGAATCGGACAATCGGCTATTCAGCAGCCCCGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGaa < 2:184245/150‑1 (MQ=255) aGCGAACGTGCAGTTTTACGCAAATTCGTCTGACTCATCTGTGAGCTGAATCGGACAATCGGCTATTCAGCAGCCCCGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCg < 2:288676/150‑1 (MQ=255) gCAAATTCGTCTGACTCATCTGTGAGCTGAATCGGACAATCGGCTATTCAGCAGCCCCGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGcc > 2:308674/1‑142 (MQ=255) gCAAATTCGTCTGACTCATCTGTGAGCTGAATCGGACAATCGGCTATTCAGCAGCCCCGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGcc < 1:308674/142‑1 (MQ=255) gctgctcaaagccttgcctcaggccggctggccgggagcggcgaatggttaactgatctcttCGCTTGTCCTGAAGCTCGGGCGGCCAAGCGaa > 1:495260‑M1/63‑94 (MQ=255) gctgctcaaagccttgcatcaggccggctggccgggagcggcgaatggttaactgatctcttCGCTTGTCCTGAAGCTCGGGCGGCCAAGCGaa < 2:495260‑M1/32‑1 (MQ=255) aTCGGACAATCGGCTATTCAGCAGCCCCGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGcg < 2:350262/112‑2 (MQ=255) aTCGGACAATCGGCTATTCAGCAGCCCCGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGcc > 1:350262/1‑112 (MQ=255) tCGGCTATTCAGCAGCCCCGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGc > 1:467089/1‑150 (MQ=255) agcagcCCCGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTg > 2:225902/1‑150 (MQ=255) ccGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTcgg < 1:225902/150‑1 (MQ=255) cGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTcggc > 1:459378/1‑150 (MQ=255) cAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTCGGCGgt < 1:266254/150‑1 (MQ=255) aaaGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTCGGCGgtg > 2:315593/1‑150 (MQ=255) ttcgcttggccgcccgagcttcaggacaagcgAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGagcagc < 2:495260‑M2/62‑1 (MQ=255) ttcgcttggccgcccgagcttcaggacaagcgAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGAGGCAAGGCTTTGagcagc > 1:495260‑M2/33‑94 (MQ=255) aaCGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTCGGCGGTGTCAGCGGc > 1:52370/1‑150 (MQ=255) cttggccgcccgagcttcaggacaagcgAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCt > 2:136569‑M2/29‑70 (MQ=255) cttggccgcccgagcttcaggacaagcgAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCt < 1:136569‑M2/42‑1 (MQ=255) cTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTCGGCGGTGTCAGCGGCTAGTAAGGCg > 1:437065/1‑150 (MQ=255) gCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTCGGCGGTGTCAGCGGCTAGTAAGGCGTtgat < 2:459378/150‑1 (MQ=255) ccAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTCGGCGGTGTCAGCGGCTAGTAAGGc > 2:426776/1‑134 (MQ=255) ccAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTCGGCGGTGTCAGCGGCTAGTAAGGc < 1:426776/134‑1 (MQ=255) aagcgAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGTTACTGCATGGCCGTTGCCTTCGGCGGTGGCAGCGGCTAGTAAGGCGTTGATGATGGCttcttc > 1:197105‑M2/6‑150 (MQ=255) aagcgAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTCGGCGGTGTCAGCGGCTAGTAAGGCGTTGATGATGGCttcttc < 2:437065‑M2/145‑1 (MQ=255) gcgAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTCGGCGGTGTCAGCGGCTAGTAAGGCGTTGATGATGGCTTCTTCCa > 2:307818‑M2/4‑150 (MQ=255) | TTGTAGTCAGGTGGTTTATTGCCACCATAGCGAACGTGCAGTTTTACGCAAATTCGTCTGACTCATCTGTGAGCTGAATCGGACAATCGGCTATTCAGCAGCCCCGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTCGGCGGTGTCAGCGGCTAGTAAGGCGTTGATGATGGCTTCTTCCA > NC_002947/4366800‑4367094 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |