New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4366918 =	14 (0.750)	4 (0.220)	4/234	NT	22.7%	intergenic (‑140/+40)	PP_3843/PP_3844	hypothetical protein/D‑aminopeptidase
	?	NC_002947	4366948 =	14 (0.780)					intergenic (‑170/+10)	PP_3843/PP_3844	hypothetical protein/D‑aminopeptidase

ATTCTCATGAGACGCTCCTACGACTTTAGTTGTAGTCAGGTGGTTTATTGCCACCATAGCGAACGTGCAGTTTTACGCAAATTCGTCTGACTCATCTGTGAGCTGAATCGGACAATCGGCTATTCAGCAGCCCCGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTCGGCGGTGTCAGCGGC  >  NC_002947/4366771‑4367065                                                                                                                                                    |                                                                                                                                                    tggaagaagccatcatcaacgccttactagccgctgacaccgccgaaggcaacggccatgcagtaccgggactggattgtgagacgctgctcaaagccttgcatcaggccggctggccgggagcggcgaatggttaactgatctcttCGc                                                                                                                                                   >  2:307818‑M1/148‑150 (MQ=255)   gaagaagccatcatcaacgccttactagccgctgccaccgccgaaggcaacggccatgcagtaacgggactggattgtgagacgctgctcaaagccttgcatcaggccggctggccgggagcggcgaatggttaactgatctcttCGCtt                                                                                                                                                 >  1:197105‑M1/146‑150 (MQ=255)   gaagaagccatcatcaacgccttactagccgctgacaccgccgaaggcaacggccatgcagtaccgggactggattgtgagacgctgctcaaagccttgcatcaggccggctggccgggagcggcgaatggttaactgatctcttCGCtt                                                                                                                                                 <  2:437065‑M1/5‑1 (MQ=255)     tcATGAGACGCTCCTACGACTTTAGTTGTAGTCAGGTGGTTTATTGCCACCATAGCGAACGTGCAGTTTTACGCAAATTCGTCTGACTCATCTGTGAGCTGAATCGGACAATCGGCTATTCAGCAGCCCCGCCAAAGACTCAACGCTTGt                                                                                                                                               >  1:177429/1‑150 (MQ=255)           gaCGCTCCTACGACTTTAGTTGTAGTCAGGTGGTTTATTGCCACCATAGCGAACGTGCAGTTTTACGCAAATTCGTCTGACTCATCTGTGAGCTGAATCGGACAATCGGCTATTCAGCAGCCCCGCCAAAGACTCAACGCTTGTCCTGaa                                                                                                                                         >  2:266254/1‑150 (MQ=255)                              ttGTAGTCAGGTGGTTTATTGACACCATAGCGAACGTGCAGTGTTACGCAAATTCTTCTGACTCATCTGTGAGCTGAATCGGACAATCGGCTATTCAGCAGCCCCGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGaa                                                                                                                      <  2:184245/150‑1 (MQ=255)                                                          aGCGAACGTGCAGTTTTACGCAAATTCGTCTGACTCATCTGTGAGCTGAATCGGACAATCGGCTATTCAGCAGCCCCGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCg                                                                                          <  2:288676/150‑1 (MQ=255)                                                                             gCAAATTCGTCTGACTCATCTGTGAGCTGAATCGGACAATCGGCTATTCAGCAGCCCCGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGcc                                                                               >  2:308674/1‑142 (MQ=255)                                                                             gCAAATTCGTCTGACTCATCTGTGAGCTGAATCGGACAATCGGCTATTCAGCAGCCCCGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGcc                                                                               <  1:308674/142‑1 (MQ=255)                                                                                      gctgctcaaagccttgcctcaggccggctggccgggagcggcgaatggttaactgatctcttCGCTTGTCCTGAAGCTCGGGCGGCCAAGCGaa                                                                                                                      >  1:495260‑M1/63‑94 (MQ=255)                                                                                      gctgctcaaagccttgcatcaggccggctggccgggagcggcgaatggttaactgatctcttCGCTTGTCCTGAAGCTCGGGCGGCCAAGCGaa                                                                                                                      <  2:495260‑M1/32‑1 (MQ=255)                                                                                                          aggccggctggccgggagcggcgaatggttaactgatctcttCGCTTGTCCTGAAGCTCGGGCGGCCAAg                                                                                                                          >  2:136569‑M1/43‑70 (MQ=255)                                                                                                          aggccggctggccgggagcggcgaatggttaactgatctcttCGCTTGTCCTGAAGCTCGGGCGGCCAAg                                                                                                                          <  1:136569‑M1/28‑1 (MQ=255)                                                                                                           aTCGGACAATCGGCTATTCAGCAGCCCCGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGcg                                                                               <  2:350262/112‑2 (MQ=255)                                                                                                           aTCGGACAATCGGCTATTCAGCAGCCCCGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGcc                                                                               >  1:350262/1‑112 (MQ=255)                                                                                                                    tCGGCTATTCAGCAGCCCCGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGc                                >  1:467089/1‑150 (MQ=255)                                                                                                                              agcagcCCCGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTg                      >  2:225902/1‑150 (MQ=255)                                                                                                                                     ccGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTcgg               <  1:225902/150‑1 (MQ=255)                                                                                                                                      cGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTcggc              >  1:459378/1‑150 (MQ=255)                                                                                                                                         cAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTCGGCGgt           <  1:266254/150‑1 (MQ=255)                                                                                                                                          aaaGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTCGGCGgtg          >  2:315593/1‑150 (MQ=255)                                                                                                                                                  aaCGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTCGGCGGTGTCAGCGGc  >  1:52370/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                    ATTCTCATGAGACGCTCCTACGACTTTAGTTGTAGTCAGGTGGTTTATTGCCACCATAGCGAACGTGCAGTTTTACGCAAATTCGTCTGACTCATCTGTGAGCTGAATCGGACAATCGGCTATTCAGCAGCCCCGCCAAAGACTCAACGCTTGTCCTGAAGCTCGGGCGGCCAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTCGGCGGTGTCAGCGGC  >  NC_002947/4366771‑4367065

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.