New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4828690 = | 33 (1.760) | 3 (0.170) | 3/228 | NT | 11.4% | coding (2545/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
? | NC_002947 | 4828734 = | 16 (0.920) | coding (2501/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
GCTGTGGGTGACCCTGCACCACATCGTTGCCGACGGCTGGTCGCTGAACATCCTGCTCGAAGAATTCGCCAAGCTGTATGCCGCTCGCTGCCAAGGCCTGGAGGCCAACCTGGCGCCGCTGCCGCTGGGTTACGCCGACTACGGCAGCTGGCAGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4828847‑4828690 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcggcGCCAGGTTGGCCTCCAGGCCTTGGCAGCGAGCGGCATACAGCTTGGCGAATTCTTCGAGCAGGATGTTCAGCGACCAGCCGTCGGCAACGATGTGGTGCAGGGTCACCCACAGCTGATGCTCTTCGTCCCCCAGGCGCACC > NC_002947/4828734‑4828874 GCTGTGGGTGACCCTGCACCACATCGTTGCCGACGGCTGGCCGCTGAACATCCTGCTCGAAGAATTCGCCAAGCTGTATGCCGCTCGCTGCCAAGGCCTGGAGGCCAACCTGGCGCCGCTGCCGCTGGGTTACGCCGACTACGGCAGCTG > 2:311211/1‑150 GTGACCCTGCACCACATCGTTGCCGACGGCTGGTCGCTGAACATCCTGCTCGAAGAATTCGCCAAGCTGTATGCCGCTCGCTGCCAAGGCCTGGAGGCCAACCTGGCGCCGCTGCCGCTGGGTTACGCCGACTACGGCAGCTGGCAGCGG > 2:446868/1‑150 CCCTGCACCACATCGTTGCCGACGGCTGGTCGCTGAACATCCTGCTCGAAGAATTCGCCAAGCTGTATGCCGCTCGCTGCCAAGGCCTGGAGGCCAACCTGGCGCCGCTGCCGCTGGGTTACGCCGACTACGGCAGCTGGCAGCGGaaat < 1:431777/150‑5 GGAGGCCAACCTGGCGCCGCTGCCGCTGGGTTACGCCGACTACGGCAGCTGGCAGCGGCGCCAGGTTGGCCTCCAGGCCTTGGCAGCGAGCGGCATACAGCTTGGCGAA < 1:249747/109‑1 GGAGGCCAACCTGGCGCCGCTGCCGCTGGGTTACGCCGACTACGGCAGCTGGCAGCGGCGCCAGGTTGGCCTCCAGGCCTTGGCAGCGAGCGGCATACAGCTTGGCGAA > 2:249747/1‑109 GCCGCTGCCGCTGGGTTACGCCGACTACGGCAGCTGGCAGCGGCGCCAGGTTGGCCTCCAGGCCTTGGCAGCGAGCGGCATACAGCTTGGCGAATTCTTCGAGCAGGATGTTCAGCGACCAGCCGTCGGCAACGATGTGGTGCAGGGTCA > 1:322507/1‑150 GGCAGCGGCGCCAGGTTGGCCTCCAGGCCTTGGCAGCGAGCGGCATACAGCTTGGCGAATTCTTCGAGCAGGATGTTCAGCGACCAGCCGTCGGCAACGATGTGGTGCAGGGTCACCCACAGCTGATGCTCTTCGTCCCCCAGGCGCACC > 1:151658/1‑150 GCTGTGGGTGACCCTGCACCACATCGTTGCCGACGGCTGGTCGCTGAACATCCTGCTCGAAGAATTCGCCAAGCTGTATGCCGCTCGCTGCCAAGGCCTGGAGGCCAACCTGGCGCCGCTGCCGCTGGGTTACGCCGACTACGGCAGCTGGCAGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4828847‑4828690 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcggcGCCAGGTTGGCCTCCAGGCCTTGGCAGCGAGCGGCATACAGCTTGGCGAATTCTTCGAGCAGGATGTTCAGCGACCAGCCGTCGGCAACGATGTGGTGCAGGGTCACCCACAGCTGATGCTCTTCGTCCCCCAGGCGCACC > NC_002947/4828734‑4828874 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |