| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4860676 | 23 (1.220) | 3 (0.170) | 3/236 | NT | 12.5% | coding (419/2331 nt) | ligA | DNA ligase |
| ? | NC_002947 | = 4860710 | 20 (1.110) | coding (385/2331 nt) | ligA | DNA ligase | |||||
TTGCTCATGTACACCTCGCCGCGCACCTCCAGCACTGCCGGCCAGCCCTTACCCTGCAACTTGAGCGGGATGTTGCGCACGGTGCGTACGTTGGCGCTGATGTCTTCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4860565‑4860676‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagCTGGTGCAGGGCGCCACCCGTGGCGACGGCACCACTGG < NC_002947/4860710‑4860673 TTGCTCATGTGCACCTCGCCGCGCACCTCCAGCACGGCCGGCCAGCCCTTACCCTGCAACTTGAGCGGGATGTTGCGCACGGTGCGTACGTTGGCGCTGATGTTTTCGCCAGCTGGTGCAGGGCGCCACCCGTGGCGACGGCACCACTGG < 2:496954/150‑1 AACTTGAGCGGGATGTTGCGCACGGTGCGTACGTTGGCGCTGATGTCTTCGCCAGCTGGTGCAGGGCGCCACCCGTGGCGACGGCACCAC > 1:66853/1‑90 AACTTGAGCGGGATGTTGCGCACGGTGCGTACGTTGGCGCTGATGTCTTCGCCAGCTGGTGCAGGGCGCCACCCGTGGCGACGGCACCAC < 2:66853/90‑1 TTGCTCATGTACACCTCGCCGCGCACCTCCAGCACTGCCGGCCAGCCCTTACCCTGCAACTTGAGCGGGATGTTGCGCACGGTGCGTACGTTGGCGCTGATGTCTTCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4860565‑4860676‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagCTGGTGCAGGGCGCCACCCGTGGCGACGGCACCACTGG < NC_002947/4860710‑4860673 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |