New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 487073516 (0.850)5 (0.330) 5/196 NT 23.4% intergenic (+40/‑80) xdhB/xdhC xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor
?NC_002947 = 4870755 20 (1.340)intergenic (+60/‑60) xdhB/xdhC xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor

CCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4870569‑4870735
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggtttacccgcgaatgTAGCGTTGGAGCTGATATCGCATTCGCGGGTAAACCCGCTCCTACAAGGGCCTTGCGTTGTCAGGGGGTGATGGTTTCCAGTTCCCGTTCGCGCGACTGTGTTTCAGCCACTGCCTTGCGCATCTGCTCGCAGCCCCACAGCACCC  <  NC_002947/4870755‑4870610
                                                                                                                                                                                                                                                                                                                         
CCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGC                                                                                                                                                                     <  2:468840/150‑1
        AGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTAC                                                                                                                                                             >  2:11272/1‑150
                GTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGG                                                                                                                                                                  >  2:160379/1‑137
                GTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCGTCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGG                                                                                                                                                                  <  1:160379/137‑1
                              AACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGTAGCGTTGGAGCT                                                                                                                                       >  1:220761/1‑150
                                            TGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGTAACTGGAAACCATCACCCCGTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGTAGCGTTGGAGCTGATATCGCATTCGC                                                                                                                         <  2:449314/150‑1
                                                                 tctGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGTAGCGTTGGAGCTGATACCACATGCGCGGGTAAACCCGCTCCTACAAG                                                                                                    <  1:142525/147‑1
                                                                     CAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGAGCGACCAGGCCTTTAGCTGATATCGCATTCGCGGGTAAACCCGCTCCTACAAGGaga                                                                                                >  2:142525/1‑147
                                                                            GTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGTAGCGTTGGAGCTGATATCGCATTCGCGGGTAAACCCGCTCCTACAAGGGCCTTGCGTT                                                                                         <  2:220761/150‑1
                                                                                                                                                        GTTTACCCGCGAATGTAGCGTTGGAGCTGATATCGCATTCGCGGGTAAACCCGCTCCTACAAGGGCCTTGCGTTGTCAGGG                                                                                  >  1:314770/1‑81
                                                                                                                                                        GTTTACCCGCGAATGTAGCGTTGGAGCTGATATCGCATTCGCGGGTAAACCCGCTCCTACAAGGGCCTTGCGTTGTCAGGG                                                                                  <  2:314770/81‑1
                                                                                                                                                               CGCGAATGTAGCGTTGGAGCTGATATCGCATTCGCGGGTAAACCCGCTCCTACAAGGGCCTTGCGTTGTCAGGGGGTGATG                                                                           >  1:93956/1‑81
                                                                                                                                                               CGCGAATGTAGCGTTGGAGCTGATATCGCATTCGCGGGTAAACCCGCTCCTACAAGGGCCTTGCGTTGTCAGGGGGTGATG                                                                           <  2:93956/81‑1
                                                                                                                                                                   AATGTAGCGTTGGAGCTGATATCGCATTCGCGGGTAAACCCGCTCCTACAAGGGCCTTGCGTTGTCAGGGGGTGATGGTTTCCAGTTCCCGTTCGCGCGACTGTGTTTCAGCCACTGCCTTGCGCATCTGCTCGCAGCCCCACAGCACCC  <  1:71603/150‑1
                                                                                                                                                                                                                                                                                                                         
CCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4870569‑4870735
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggtttacccgcgaatgTAGCGTTGGAGCTGATATCGCATTCGCGGGTAAACCCGCTCCTACAAGGGCCTTGCGTTGTCAGGGGGTGATGGTTTCCAGTTCCCGTTCGCGCGACTGTGTTTCAGCCACTGCCTTGCGCATCTGCTCGCAGCCCCACAGCACCC  <  NC_002947/4870755‑4870610

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.