| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4870735 | 16 (0.850) | 5 (0.330) | 5/196 | NT | 23.4% | intergenic (+40/‑80) | xdhB/xdhC | xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor |
| ? | NC_002947 | = 4870755 | 20 (1.340) | intergenic (+60/‑60) | xdhB/xdhC | xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor | |||||
ATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTGGTGACCA > NC_002947/4870589‑4870881 | aTGCGCCGGCAACGCCGGAGCGGGTTCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAACCCATCACCCCCTGACAACGCAGGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGa < 1:215199/150‑1 (MQ=255)aTGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGATGCGTGTGGATGCGTAATGCAGTTTCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAAACCACGGCCCTTGTATGAGTGGGTTTACCCGAGAATGCGa < 2:111457/150‑1 (MQ=255) aaCGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGtagcgttggagct > 1:220761‑M1/1‑137 (MQ=255) gggTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcatt < 1:71603‑M2/150‑5 (MQ=255) tGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGTAACTGGAAACCATCACCCCGTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGtagcgttggagctgatatcgcattcgc < 2:449314‑M1/150‑28 (MQ=255) tctgcaagGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGtagcgttggagctgataccacatgcgcgggtaaacccgctcctacaag < 1:142525‑M1/147‑49 (MQ=255) gcAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCTAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCACGGt > 2:40050/1‑150 (MQ=255) cAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGAGCGACcaggcctttagctgatatcgcattcgcgggtaaacccgctcctacaaggaga > 2:142525‑M1/1‑98 (MQ=255) gTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGtagcgttggagctgatatcgcattcgcgggtaaacccgctcctacaagggccttgcgtt < 2:220761‑M1/150‑60 (MQ=255) gCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATgg < 1:11272/150‑1 (MQ=255) tGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCt > 2:390727/1‑150 (MQ=255) caGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGat > 2:281965/1‑83 (MQ=255) caGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGat < 1:281965/83‑1 (MQ=255) gTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGt < 1:390727/150‑1 (MQ=255) gcgcgAACGGGAACGGGAAACCATCACCCCCTGACAACGAAACGCTTTCCCTACAGGGGGTTTTCCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGc < 2:474208/150‑1 (MQ=255) gcgAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATGTCAGCAACAACGCCACAATCGCGGGTAAACCCGCTCCTCCCATGGTCGGCAACGTGGCTGAGAGAGGTGGcat > 2:327638/1‑150 (MQ=37) cTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAAt < 1:45574/150‑1 (MQ=255) tGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATg > 2:254856/1‑150 (MQ=255) cATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgcg < 2:93956‑M2/81‑9 (MQ=255) cATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgcg > 1:93956‑M2/1‑73 (MQ=255) cATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAAc > 1:33733/1‑150 (MQ=255) tCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGGTTAGAGAGGTTGCATCATGCACCAATGGATCAACGc > 1:457137/1‑150 (MQ=255) cccTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaac > 1:314770‑M2/1‑66 (MQ=255) cccTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaac < 2:314770‑M2/81‑16 (MQ=255) gACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGa < 2:33733/150‑1 (MQ=255) aCAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCGTGGCTTAGAGAGGTTGCATCATGCATCAATGGATCAACGCCCACCCCGac > 1:165843/1‑150 (MQ=255) aaCGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatggtttccagttcccgttcgcgcgactgtgtttcagccac < 2:220761‑M2/150‑92 (MQ=255) aaCGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGacca < 2:71603/150‑1 (MQ=255) tctccttgTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTAAAGGCCTGgtcgctcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatggtttccagttcccgttcgcgcgactgtgtttcagccactgccttg > 2:142525‑M2/4‑52 (MQ=255) ccTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCCCCAACGCTACAAAAGAGTGTAAATCCTTTCGTACCAGGGTCGGTAGCATGGCTTATAGAGGTTTCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGt < 2:57043/150‑1 (MQ=255) cTTGTAGGAGCGGGTTTACCCGCGCATGTGGTATCAGCTCCAACGCTAcattcgcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatggtttccagttcccgttcgcgcgactgtgtttcagccactgccttgcaga < 1:142525‑M2/150‑103 (MQ=255) cTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTg > 2:374962/1‑150 (MQ=255) gTTTACCCGCGAATGtagcgttggagctgatatcgcattcgcgggtaaacccgctcctacaagggccttgcgttgtcaggg < 2:314770‑M1/81‑67 (MQ=255) gTTTACCCGCGAATGtagcgttggagctgatatcgcattcgcgggtaaacccgctcctacaagggccttgcgttgtcaggg > 1:314770‑M1/1‑15 (MQ=255) cgcgAATGtagcgttggagctgatatcgcattcgcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatg > 1:93956‑M1/1‑8 (MQ=255) cgcgAATGtagcgttggagctgatatcgcattcgcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatg < 2:93956‑M1/81‑74 (MQ=255) gcgAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaacccgctcctacaagggccttgcgttgtcacggggtgatggtttccagttaccgttcgcgcgactgtgtttcagccactgccttgcgcatctgctcgcagccccacagca < 2:449314‑M2/150‑124 (MQ=255) gcgAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTGGTGa < 1:254856/150‑1 (MQ=255) aaTGtagcgttggagctgatatcgcattcgcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatggtttccagttcccgttcgcgcgactgtgtttcagccactgccttgcgcatctgctcgcagccccacagcaccc < 1:71603‑M1/150‑147 (MQ=255) | ATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTGGTGACCA > NC_002947/4870589‑4870881 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |