New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4870735	16 (0.850)	5 (0.330)	5/196	NT	23.4%	intergenic (+40/‑80)	xdhB/xdhC	xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor
	?	NC_002947	= 4870755	20 (1.340)					intergenic (+60/‑60)	xdhB/xdhC	xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor

GGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTGGTGACCATCATCGAAGAGCGCGGCT  >  NC_002947/4870610‑4870899                                                                                                                                                  |                                                                                                                                                 gggTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcatt                                                                                                                                              <  1:71603‑M2/150‑5 (MQ=255)                            gcAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCTAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCACGGt                                                                                                                   >  2:40050/1‑150 (MQ=255)                                       gCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATgg                                                                                                        <  1:11272/150‑1 (MQ=255)                                         tGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCt                                                                                                      >  2:390727/1‑150 (MQ=255)                                                  gTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGt                                                                                             <  1:390727/150‑1 (MQ=255)                                                     gcgcgAACGGGAACGGGAAACCATCACCCCCTGACAACGAAACGCTTTCCCTACAGGGGGTTTTCCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGc                                                                                          <  2:474208/150‑1 (MQ=255)                                                       gcgAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATGTCAGCAACAACGCCACAATCGCGGGTAAACCCGCTCCTCCCATGGTCGGCAACGTGGCTGAGAGAGGTGGcat                                                                                        >  2:327638/1‑150 (MQ=37)                                                                  cTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAAt                                                                             <  1:45574/150‑1 (MQ=255)                                                                   tGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATg                                                                            >  2:254856/1‑150 (MQ=255)                                                                          cATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgcg                                                                                                                                          <  2:93956‑M2/81‑9 (MQ=255)                                                                          cATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgcg                                                                                                                                          >  1:93956‑M2/1‑73 (MQ=255)                                                                          cATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAAc                                                                     >  1:33733/1‑150 (MQ=255)                                                                            tCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGGTTAGAGAGGTTGCATCATGCACCAATGGATCAACGc                                                                   >  1:457137/1‑150 (MQ=255)                                                                                 cccTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaac                                                                                                                                   >  1:314770‑M2/1‑66 (MQ=255)                                                                                 cccTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaac                                                                                                                                   <  2:314770‑M2/81‑16 (MQ=255)                                                                                     gACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGa                                                          <  2:33733/150‑1 (MQ=255)                                                                                      aCAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCGTGGCTTAGAGAGGTTGCATCATGCATCAATGGATCAACGCCCACCCCGac                                                         >  1:165843/1‑150 (MQ=255)                                                                                        aaCGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatggtttccagttcccgttcgcgcgactgtgtttcagccac                                                       <  2:220761‑M2/150‑92 (MQ=255)                                                                                        aaCGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGacca                                                       <  2:71603/150‑1 (MQ=255)                                                                                               tctccttgTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTAAAGGCCTGgtcgctcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatggtttccagttcccgttcgcgcgactgtgtttcagccactgccttg                                                >  2:142525‑M2/4‑52 (MQ=255)                                                                                                  ccTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCCCCAACGCTACAAAAGAGTGTAAATCCTTTCGTACCAGGGTCGGTAGCATGGCTTATAGAGGTTTCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGt                                             <  2:57043/150‑1 (MQ=255)                                                                                                   cTTGTAGGAGCGGGTTTACCCGCGCATGTGGTATCAGCTCCAACGCTAcattcgcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatggtttccagttcccgttcgcgcgactgtgtttcagccactgccttgcaga                                            <  1:142525‑M2/150‑103 (MQ=255)                                                                                                   cTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTg                                            >  2:374962/1‑150 (MQ=255)                                                                                                                        gcgAATGCGATATCAGCTCCAACGCTAcattcgcgggtaaacccgctcctacaagggccttgcgttgtcacggggtgatggtttccagttaccgttcgcgcgactgtgtttcagccactgccttgcgcatctgctcgcagccccacagca                       <  2:449314‑M2/150‑124 (MQ=255)                                                                                                                        gcgAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTGGTGa                       <  1:254856/150‑1 (MQ=255)                                                                                                                                gATATCAGCTCCAACGCTACATTCGCGGGTAAAACCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTGGTGACCatcatc               >  1:497840/1‑150 (MQ=255)                                                                                                                                   atCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTGGTGACCATCATCGaa            <  1:374962/150‑1 (MQ=255)                                                                                                                                      aGCTCCAACGCTAcattcgcgggtaaacccgctcctacaagggccttgcgttgtcagggggtgatggtttccagttcccgttcgcgcgactgtgtttcagccactgccttgcgcatctgctcgcagccccacagcacccgctccggcgtt         >  1:220761‑M2/1‑13 (MQ=255)                                                                                                                                       gCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGac                                                         <  2:26933/101‑1 (MQ=255)                                                                                                                                       gCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGac                                                         >  1:26933/1‑101 (MQ=255)                                                                                                                                             ccGCTACATTCGCGGGGAAACGCGCTCCTGCCAGAGGCGGTAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTGGTGACCATCATCGAAGAGCGCGGct  >  2:413003/2‑150 (MQ=255)                                                                                                                                                  |                                                                                                                                                 GGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCCGCGAATGCGATATCAGCTCCAACGCTACATTCGCGGGTAAACCCGCTCCTACCAGGGTCGGCAGCATGGCTTAGAGAGGTTGCATCATGCACCAATGGATCAACGCCCTCGCCGACCACCAGTCCCGTGGCGAAGCCTGCGTGCTGGTGACCATCATCGAAGAGCGCGGCT  >  NC_002947/4870610‑4870899

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.