New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5365167	23 (1.220)	3 (0.160)	3/242	NT	15.1%	coding (1437/1914 nt)	ftsH	integral membrane ATP‑dependent zinc metallopeptidase
	?	NC_002947	= 5365227	11 (0.600)					coding (1377/1914 nt)	ftsH	integral membrane ATP‑dependent zinc metallopeptidase

TTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5365084‑5365167 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgCTACAGCCTCTCCAAGCGTGCGCTGATCAGCCAGATCTGCTCGCTGTATGGCGGCCGTATCGCCGAGGAGATGACCTTGGGCTTCGATGGCGTGACCACTGGCGCGTCCAACGACATCATGCGCGCCAGCCAGCTCGCTCGTAACATG  <  NC_002947/5365227‑5365080                                                                                                                                                                                                                                          TTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTAACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGCTACAGCCTCTCCAAGCGTGCGCTGATCAGCCAGATCTGCTCGCTGTATGGCGGCCGTATCGCCGA                                                                                    <  1:411044/150‑1                                                    ACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGCTACAGCCTCTCCAAGCGTGCGCTGATCAGCCAGATCTGCTCGCTGTATGGCGGCCGTATC                                                                                         <  1:479901/94‑1                                                    ACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGCTACAGCCTCTCCAAGCGTGCGCTGATCAGCCAGATCTGCTCGCTGTATGGCGGCCGTATC                                                                                         >  2:479901/1‑94                                                                                   CGCTACAGCCTCTCCAAGCGTGCGCTGATCAGCCAGATCTGCTCGCTGTATGGCGCCCGTATCACCGAGGAGATGACCTCGGGCTTCGATGGCGTGACCACTGGCGCGTCCAACGACATCATGCCCGCCAGCCAGCTCGCTCGTAACATG  >  2:52540/1‑150                                                                                                                                                                                                                                          TTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5365084‑5365167 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgCTACAGCCTCTCCAAGCGTGCGCTGATCAGCCAGATCTGCTCGCTGTATGGCGGCCGTATCGCCGAGGAGATGACCTTGGGCTTCGATGGCGTGACCACTGGCGCGTCCAACGACATCATGCGCGCCAGCCAGCTCGCTCGTAACATG  <  NC_002947/5365227‑5365080

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.