| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5365167 | 23 (1.220) | 3 (0.160) | 3/242 | NT | 15.1% | coding (1437/1914 nt) | ftsH | integral membrane ATP‑dependent zinc metallopeptidase |
| ? | NC_002947 | = 5365227 | 11 (0.600) | coding (1377/1914 nt) | ftsH | integral membrane ATP‑dependent zinc metallopeptidase | |||||
CTCTTCCTCTGCATACATCAGCGGGCCGAGCTTCTCGGACAGGCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGA‑TACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGC > NC_002947/5365023‑5365314 | ctctTCCTCTGCATACATCAGCGGGCCGAGCTTTCCGGACTGGCCCCATTTGGTCACCATGTTACGAGCGAGTGCGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGA‑TACg < 1:366938/150‑1 (MQ=255) ccGAGCTTCTCGGACAGGCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGA‑TACGGCCGCCATACAGCGAGCAGATCTgg < 2:453858/150‑1 (MQ=255) gAGCTTCTCGGACAGGCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGA‑TACGGCCGCCATACAGCGAGCAGATCTGGCt > 1:455904/1‑150 (MQ=255) ttCTCGGACAGGCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCGCCTCGGCGA‑TACGGCCGCCATACAGCGAGAAGATCTGGCTGCTc > 2:232275/1‑150 (MQ=255) tctgGGACAGGCACAATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGAAGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCANCTCCTCGGCGA‑TACGGCCGCCATACAGCGAGCAGATCTGGCTGATCa < 1:232275/150‑1 (MQ=255) gCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGA‑TACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCtt < 2:455904/150‑1 (MQ=255) ccccATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGACG‑TAAAGCGCGAAAACTTGCCCAGGTCGGCCTCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTg > 1:59657/1‑150 (MQ=255) ccATTTGGTCACCATGTTACGAGCGCGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCCAGCCAGCGGCGA‑TACGGCCGCCATACAGCGAGCAGGTCTGGCTGATCAGCGCACGCTTGga > 1:260735/1‑150 (MQ=255) aTTTGGTCACCATGTTACGCGCGAGCTGGCTGGCGCGCGTGATGTTGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCCCGGCGC‑TCCGCCCGCAACACAGCGAGCATGTCCGGCTGATCAGCGCACGCGTGtaga < 2:160188/150‑1 (MQ=255) tCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGA‑TACGGCCGCCATACAGCGAGCAGATCTgg < 2:488272/122‑1 (MQ=255) tCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGA‑TACGGCCGCCATACAGCGAGCAGATCTgg > 1:488272/1‑122 (MQ=255) cATGTTACGAGCGAGCTGGCTGGCGGGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCGAGGTCATCTCCTCGGTGA‑TACGGGCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGcg > 2:52540‑M2/1‑148 (MQ=255) gTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGA‑TACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTa < 1:396976/144‑1 (MQ=255) gTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGA‑TACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTa > 2:396976/1‑144 (MQ=255) ttACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTAACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGctacagcctctccaagcgtgcgctgatcagccagatctgctcgctgtatggcggccgtatcgccga < 1:411044‑M1/150‑67 (MQ=255) gcgcgcATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGA‑TACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATg < 2:263917/150‑1 (MQ=255) gTTGGACGCGCCAGTGGTCACGCAATAGAAGCCCAAGGTCATCTCCTCGGCGA‑TACGGCCTCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTAGGGGAGGCTGTAACGGTGTTTTTCCGTCTTGGACATGTTGACACCCAAGGc < 2:260735/150‑1 (MQ=255) gACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGA‑TACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGa < 2:59657/150‑1 (MQ=255) tCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGA‑TACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGgatga > 1:66003/1‑150 (MQ=255) aCGCCATCGAAGCCCAAGGTCATCTCCTCGGCGctacagcctctccaagcgtgcgctgatcagccagatctgctcgctgtatggcggccgtatc > 2:479901‑M1/1‑33 (MQ=255) aCGCCATCGAAGCCCAAGGTCATCTCCTCGGCGctacagcctctccaagcgtgcgctgatcagccagatctgctcgctgtatggcggccgtatc < 1:479901‑M1/94‑62 (MQ=255) cGCCATCGAAGCCCAAGGTCATCTCCTCGGCGA‑TACGGCCGCCATACAGCGAGCAGATCt < 1:112297/60‑1 (MQ=255) cGCCATCGAAGCCCAAGGTCATCTCCTCGGCGA‑TACGGCCGCCATACAGCGAGCAGATCt > 2:112297/1‑60 (MQ=255) tCATCTCCTCGGCGA‑TACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATc < 2:276769/131‑1 (MQ=255) tCATCTCCTCGGCGA‑TACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATc > 1:276769/1‑131 (MQ=255) cctcGGCGA‑TACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTg < 2:62723/134‑1 (MQ=255) cctcGGCGA‑TACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTg > 1:62723/1‑134 (MQ=255) tcGGCGA‑TACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGcgccgaggagatgaccttgggcttcgatggcgttaccactggcgcgtccaacgacatcatgcgcgccagccagctcgctcgtaa < 1:411044‑M2/150‑85 (MQ=255) tcGGCGA‑TACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCa > 2:456937/1‑150 (MQ=255) cgctacagcctctccaagcgtgcgctgatcagccagatctgctcgctgtatggcgcccgtatcaccgaggagatgacctcgggcttcgatggcgtgaccactggcgcgtccaacgacatcatgcccgccagccagctcgctcgtaacatg > 2:52540‑M1/1‑2 (MQ=255) gA‑TACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGcgccgaggagatgaccttgggcttcgatggcgt > 2:479901‑M2/1‑61 (MQ=255) gA‑TACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGcgccgaggagatgaccttgggcttcgatggcgt < 1:479901‑M2/94‑34 (MQ=255) | CTCTTCCTCTGCATACATCAGCGGGCCGAGCTTCTCGGACAGGCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGA‑TACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGC > NC_002947/5365023‑5365314 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |