New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5365167	23 (1.220)	3 (0.160)	3/242	NT	15.1%	coding (1437/1914 nt)	ftsH	integral membrane ATP‑dependent zinc metallopeptidase
	?	NC_002947	= 5365227	11 (0.600)					coding (1377/1914 nt)	ftsH	integral membrane ATP‑dependent zinc metallopeptidase

CATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGC  >  NC_002947/5365080‑5365321                                                                                                                                                    |                                                                                               cATGTTACGAGCGAGCTGGCTGGCGGGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCGAGGTCATCTCCTCGGTGATACGGGCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGcg                                                                                              >  2:52540‑M2/1‑148 (MQ=255)                       gcgcgcATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATg                                                                        <  2:263917/150‑1 (MQ=255)                                     gTTGGACGCGCCAGTGGTCACGCAATAGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCTCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTAGGGGAGGCTGTAACGGTGTTTTTCCGTCTTGGACATGTTGACACCCAAGGc                                                          <  2:260735/150‑1 (MQ=255)                                         gACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGa                                                      <  2:59657/150‑1 (MQ=255)                                                      tCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGgatga                                         >  1:66003/1‑150 (MQ=255)                                                                           tCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATc                                       >  1:276769/1‑131 (MQ=255)                                                                           tCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATc                                       <  2:276769/131‑1 (MQ=255)                                                                                 cctcGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTg                              >  1:62723/1‑134 (MQ=255)                                                                                 cctcGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTg                              <  2:62723/134‑1 (MQ=255)                                                                                   tcGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGcgccgaggagatgaccttgggcttcgatggcgttaccactggcgcgtccaacgacatcatgcgcgccagccagctcgctcgtaa            <  1:411044‑M2/150‑85 (MQ=255)                                                                                   tcGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCa            >  2:456937/1‑150 (MQ=255)                                                                                        gATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGcgccgaggagatgaccttgggcttcgatggcgt                                                               <  1:479901‑M2/94‑34 (MQ=255)                                                                                        gATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGcgccgaggagatgaccttgggcttcgatggcgt                                                               >  2:479901‑M2/1‑61 (MQ=255)                                                                                            cGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAgg   <  1:152663/150‑1 (MQ=255)                                                                                             ggCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGc  <  1:456937/150‑1 (MQ=255)                                                                                                                                                    |                                                                                               CATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGC  >  NC_002947/5365080‑5365321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.