| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5957953 = | 18 (0.960) | 4 (0.230) | 4/230 | NT | 18.3% | coding (1301/2856 nt) | cyaA | adenylate cyclase |
| ? | NC_002947 | 5957991 = | 19 (1.080) | coding (1339/2856 nt) | cyaA | adenylate cyclase | |||||
CGCTGTACAGCTCCCAGTGGTAGCTGCCCGGCTCCTTGCGGTTGGGTGCCTGGACCAGCGTCAGGGTGTCTTCGGCGAGGTCAGGGGCGATGCCGGGGTTAATCACTTCGACCTTGCCGGCGCGGCGCTCGAAGGCGGCGTACAGGCGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5958105‑5957953‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccggcAAGGTCGAAGTGATTAACCCCGGCATCGCCCCTGACCTCGCCGAAGACACCCTGACGCTGGTCCAGGCACCCAACCGCAAGGAGCCGGGCAGCTACCACTGGGAGCTGTACAGCGGCAACCTGAGCACCCATGAGGTACAGCACT > NC_002947/5957991‑5958135 CGCTGTACAGCTCCCAGTGGTAGCTGCCCGGCTCCTTGCGGTTGGGTGCCTGGACCAGCGTCAGGGTGTCTTCGGCGAGGTCAGGGGCGATGCCGGGGTTAATCACTTCGACCTTGCCGGCGCGGCGCTCGAAGGCGGCGTACAGGCGCC > 1:444576/1‑150CGCTGTACAGCTCCCAGTGGTAGCTGCCCGGCTCCTTGCGGTTGGGTGCCTGGACCAGCGTCAGGGTGTCTTCGGCGAGGTCAGGGGCGATGCCGGGGTTAATCACTTCGACCTTGCCGGCGCGGCGCTCGAAGGCGGCGTACAGGCGCC > 1:477130/1‑150 GCTGTACAGCTCCCAGTGGTAGCTGCCCGGCTCCTTGCGGTTGGGTGCCTGGACCAGCGTCAGGGTGTCTTCGGCGAGGTCAGGGGCGATGCCGGGGTTAATCACTTCGACCTTGCCGGCGCGGCGCTCGAAGGCGGCGTACAGGCGCCG < 1:392212/150‑1 CAGCGTCAGGGTGTCTTCGGCGAGGTCAGGGGCGATGCCGGGGTTAATCACTTCGACCTTGCCGGCGCGGCGCTCGAAGGCGGCGTACAGGCGCCGG > 1:489927/1‑97 CAGCGTCAGGGTGTCTTCGGCGAGGTCAGGGGCGATGCCGGGGTTAATCACTTCGACCTTGCCGGCGCGGCGCTCGAAGGCGGCGTACAGGCGCCGG < 2:489927/97‑1 CCTTGCCGGCGCGGCGCTCGAAGGCGGCGTACAGGCGCCGGCAAGGTCGAAGTGATTAACCCCGGCATCGCCCCTGACCTCGCCGAAGACACCTTGACGCTGGTCCAGGCACCCAACCGCAAGGAGCCGGGCAGCTACCACTGGGAG > 1:331532/1‑147 CCTTGCCGGCGCGGCGCTCGAAGGCGGCGTACAGGCGCCGGCAAGGTCGAAGTGATTAACCCCGGCATCGCCCCTGACCTCGCCGAAGACACCTTGACGCTGGTCCAGGCACCCAACCGCAAGGAGCCGGGCAGCTACCACTGGGAG < 2:331532/147‑1 GGCGCGGCGCTCGAAGGCGGCGTACAGGCGCCGGCAAGGTCGAAGTGATTAACCCCGGCATCGCCCCTGACCTCGCCGAAGACACCCTGACGCTGGTCCAGGCACCCAACCGCAAGGAGCCG > 1:326231/1‑122 GGCGCGGCGCTCGAAGGCGGCGTACAGGCGCCGGCAAGGTCGAAGTGATTAACCCCGGCATCGCCCCTGACCTCGCCGAAGACACCCTGACGCTGGTCCAGGCACCCAACCGCAAGGAGCCG < 2:326231/122‑1 CCGGCAAGGTCGAAGTGATTAACCCCGGCATCGCCCCTGACCTCGCCGAAGACACCCTGACGCTGGTCCAGGCACCCAACCGCAAGGAGCCGGGCAGCTACCACTGGGAGCTGTACAGCGGCAACCTGAGCACCCATGAGGTACAGCACT < 1:437747/150‑1 CGCTGTACAGCTCCCAGTGGTAGCTGCCCGGCTCCTTGCGGTTGGGTGCCTGGACCAGCGTCAGGGTGTCTTCGGCGAGGTCAGGGGCGATGCCGGGGTTAATCACTTCGACCTTGCCGGCGCGGCGCTCGAAGGCGGCGTACAGGCGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5958105‑5957953‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccggcAAGGTCGAAGTGATTAACCCCGGCATCGCCCCTGACCTCGCCGAAGACACCCTGACGCTGGTCCAGGCACCCAACCGCAAGGAGCCGGGCAGCTACCACTGGGAGCTGTACAGCGGCAACCTGAGCACCCATGAGGTACAGCACT > NC_002947/5957991‑5958135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |