New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6117789	11 (0.590)	3 (0.170)	3/236	NT	16.4%	coding (42/471 nt)	PP_5367	transketolase domain‑containing protein
	?	NC_002947	= 6117858	20 (1.110)					intergenic (‑28/+68)	PP_5367/PP_5368	transketolase domain‑containing protein/MFS transporter

GGACCTGCCGCAGCGATCGCTTGTTCGGACCCTACGAACAAATCCGCGCCGATCACACCGGCAATCGACAACATGGTCACATGTCGAGGCTTGAATCCCTGAGCCAACTGATCGCTGGCTTTCCCAGACGTCGTCATAGTCATTATGGTCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6117636‑6117789 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgTTTTCGCTCTCTATGGTTAAGCGGTGAAGTGTCCCTGGCACTGCACCCTACCCATAACAAGAGCAAAAGCAGGGACCATAAT  <  NC_002947/6117858‑6117777                                                                                                                                                                                                                                              GGACCTGCCGCAGCGATCGCTTGTTCGGACCCTACGAACAAATCCGCGCCGATCACACCGGCAATCGACAACATGGTCACATGTCGAGGCTTGAATCCCTGAGCCAACTGATCGCTGGCTTTCCCAGACGTCGTCATAGTCATTATGGTC                                                                                        <  2:428510/150‑1                                                                                       AGGCTTGAATCCCTGAGCCAACTGATCGCTGGCTTTCCCAGACGTCGTCATAGTCATTATGGTCCCTGTTTTCGCTCTCTATGGTTAAGCGGTGAAGTGTCCCTGGCACTGCACCCTACCCATAACAAGAGCAAAAGCAGGGACCATAAT  <  2:341444/150‑1                                                                                           TTGAATCCCTGAGCCAACTGATCGCTGGCTTTCCCAGACGTCGTCATAGTCATTATGGTCCCTGTTTTCGCTCTCTATGGTTAAGCGGTGAAGTGTCCCTGGCACTGCACCCTACCCATAACAAGAGCAAAAGCAGGGA         >  1:268878/1‑139                                                                                           TTGAATCCCTGAGCCAACTGATCGCTGGCTTTCCCAGACGTCGTCATAGTCATTATGGTCCCTGTTTTCGCTCTCTATGGTTAAGCGGTGAAGTGTCCCTGGCACTGCACCCTACCCATAACAAGAGCAAAAGCAGGGA         <  2:268878/139‑1                                                                                                                                                                                                                                              GGACCTGCCGCAGCGATCGCTTGTTCGGACCCTACGAACAAATCCGCGCCGATCACACCGGCAATCGACAACATGGTCACATGTCGAGGCTTGAATCCCTGAGCCAACTGATCGCTGGCTTTCCCAGACGTCGTCATAGTCATTATGGTCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6117636‑6117789 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgTTTTCGCTCTCTATGGTTAAGCGGTGAAGTGTCCCTGGCACTGCACCCTACCCATAACAAGAGCAAAAGCAGGGACCATAAT  <  NC_002947/6117858‑6117777

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.