New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5171015 =	32 (1.700)	3 (0.160)	3/240	NT	8.8%	coding (1196/1308 nt)	PP_4548	oxidoreductase
	?	NC_002947	5171054 =	31 (1.690)					coding (1235/1308 nt)	PP_4548	oxidoreductase

ATGGGCATCGTGGTCAACCGCATCCCGCAGCTGGGCAAGCTGTCGGACAACGTGTGGTACTGCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGG  >  NC_002947/5170867‑5171163                                                                                                                                                     |                                                                                                                                                     ccctttcgcgacacaaggccccacaataagatgcggcgccgtcttcagacattgtgagtccctgtaggcgcaactcagcgcagcttctcaagcatctggtaataccacatccccgccgccagcagcgggttccccagcaagtcccccaTc                                                                                                                                                     >  1:119711‑M1/149‑150 (MQ=255)        tCGTGGTCAACCGCATCCCGCAGCTGGGCAAGCTGTCGGACAACGTGTGGTACTGCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCt                                                                                                                                              <  1:214420/150‑1 (MQ=255)                aaCCGCATCCCGCAGCTGGGCAAGCTGTCGGACAACGTGTGGTACTGCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTAGCCCAg                                                                                                                                      >  1:152929/1‑150 (MQ=255)                  ccGCATCCCGCAGCTGGGCAAGCTGTCGGACAACGTGTGGTACTGCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTg                                                                                                                                    >  1:205592/1‑150 (MQ=255)                         ccGCAGCTGGGCAAGCTGTCGGACAACGTGTGGTACTGCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGa                                                                                                                                                   <  1:7128/128‑1 (MQ=255)                         ccGCAGCTGGGCAAGCTGGCGGACAACGTGTGGTACTGCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGa                                                                                                                                                   >  2:7128/1‑128 (MQ=255)                                        cTGTCGGACAACGTGTGGTACTGCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATg                                                                                                              >  2:171159/1‑150 (MQ=255)                                           tCGGACAACGTGTGGTACTGCCAGGGTTACTCGGGTCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATgggg                                                                                                           >  2:41606/1‑150 (MQ=255)                                             ggACAACGTGTGGTACTGCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGa                                                                                                         <  1:171159/150‑1 (MQ=255)                                             ggACAACGTGTGGTACTGCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGa                                                                                                         >  2:271326/1‑150 (MQ=255)                                                    ttgtgagtccctgtaggcgcaactcagcgcagcttctcaagcatctggtaataccacatccccgccgccagcagcgggttccccagcaagtcccccaTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTg                                                                                                  >  2:188407‑M1/98‑150 (MQ=255)                                                    gtgtGGTACTGCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGTTGCCGATGGTGGAGTCGCTg                                                                                                  <  2:59365/150‑1 (MQ=255)                                                     tgtgGTACTGCCACGGTTACTCGGGGCATGGCATTGCCACCAGCCACAGCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTgg                                                                                                 >  2:465618/1‑150 (MQ=255)                                                              gCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAAc                                                                                            >  2:389741/1‑146 (MQ=255)                                                              gCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAAc                                                                                            <  1:389741/146‑1 (MQ=255)                                                              gCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCgc                                                                                        <  1:338886/150‑1 (MQ=255)                                                              gCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCgc                                                                                        >  2:308077/1‑150 (MQ=255)                                                              ctgtaggcgcaactcagcgcagcttctcaagcatctggtaataccacatccccgccgccagcagcgggttccccagcaagtcccccaTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATg                                                                                                              <  1:133622‑M1/41‑1 (MQ=255)                                                              ctgtaggcgcaactcagcgcagcttctcaagcatctggtaataccacatccccgccgccagcagcgggttccccagcaagtcccccaTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATg                                                                                                              >  2:133622‑M1/88‑128 (MQ=255)                                                               ccAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCgct                                                                                       >  1:317195/1‑150 (MQ=255)                                                                          cGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGcggcgg                                                                            <  2:317195/150‑1 (MQ=255)                                                                                  ctcatTGCCACCAGCCACATCATGGGCGAGATCATGGCCGACGGGTTTGGAGCAACCCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTgg                                                                    <  2:13148/148‑1 (MQ=255)                                                                                     atTGCCACCAGCCACATCATGGGCGACATGATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTag                                                                 >  1:13148/1‑149 (MQ=255)                                                                                         ccaccaGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTAcc                                                             <  2:205592/150‑1 (MQ=255)                                                                                          caccaGCCACATCATCGGCGCGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCAGGTACAGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCa                                                            >  2:13892/1‑150 (MQ=255)                                                                                                         gggCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCt                                             >  2:88420/1‑150 (MQ=255)                                                                                                               gaTCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTg                                       >  1:22852/1‑150 (MQ=255)                                                                                                               gaTCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTg                                       >  1:22851/1‑150 (MQ=255)                                                                                                                   aTGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGtt                                   >  2:33197/1‑150 (MQ=255)                                                                                                                     ggCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTgc                                 <  2:22851/150‑1 (MQ=255)                                                                                                                     ggCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTgc                                 <  2:22852/150‑1 (MQ=255)                                                                                                                     ggCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTgc                                 <  1:271326/150‑1 (MQ=255)                                                                                                                                 gACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGAc                     <  1:41606/150‑1 (MQ=255)                                                                                                                                    cGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCgct                                                                                       >  1:439880/1‑81 (MQ=255)                                                                                                                                    cGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCgct                                                                                       <  2:439880/81‑1 (MQ=255)                                                                                                                                      ggACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTcac                 >  2:229693/1‑149 (MQ=255)                                                                                                                                      ggACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTcac                 <  1:229693/149‑1 (MQ=255)                                                                                                                                       gACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACaa               <  1:33197/150‑1 (MQ=255)                                                                                                                                                    ttCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACgg  >  1:455556/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                     ATGGGCATCGTGGTCAACCGCATCCCGCAGCTGGGCAAGCTGTCGGACAACGTGTGGTACTGCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGG  >  NC_002947/5170867‑5171163

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.