New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5171015 =	32 (1.700)	3 (0.160)	3/240	NT	8.8%	coding (1196/1308 nt)	PP_4548	oxidoreductase
	?	NC_002947	5171054 =	31 (1.690)					coding (1235/1308 nt)	PP_4548	oxidoreductase

CTGTCGGACAACGTGTGGTACTGCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGC  >  NC_002947/5170906‑5171203                                                                                                                                                     |                                                                                                                                                      cTGTCGGACAACGTGTGGTACTGCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATg                                                                                                                                                      >  2:171159/1‑150 (MQ=255)    tCGGACAACGTGTGGTACTGCCAGGGTTACTCGGGTCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATgggg                                                                                                                                                   >  2:41606/1‑150 (MQ=255)      ggACAACGTGTGGTACTGCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGa                                                                                                                                                 <  1:171159/150‑1 (MQ=255)      ggACAACGTGTGGTACTGCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGa                                                                                                                                                 >  2:271326/1‑150 (MQ=255)             ttgtgagtccctgtaggcgcaactcagcgcagcttctcaagcatctggtaataccacatccccgccgccagcagcgggttccccagcaagtcccccaTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTg                                                                                                                                          >  2:188407‑M1/98‑150 (MQ=255)             gtgtGGTACTGCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGTTGCCGATGGTGGAGTCGCTg                                                                                                                                          <  2:59365/150‑1 (MQ=255)              tgtgGTACTGCCACGGTTACTCGGGGCATGGCATTGCCACCAGCCACAGCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTgg                                                                                                                                         >  2:465618/1‑150 (MQ=255)                       gCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAAc                                                                                                                                    >  2:389741/1‑146 (MQ=255)                       gCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAAc                                                                                                                                    <  1:389741/146‑1 (MQ=255)                       gCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCgc                                                                                                                                >  2:308077/1‑150 (MQ=255)                       gCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCgc                                                                                                                                <  1:338886/150‑1 (MQ=255)                       ctgtaggcgcaactcagcgcagcttctcaagcatctggtaataccacatccccgccgccagcagcgggttccccagcaagtcccccaTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATg                                                                                                                                                      >  2:133622‑M1/88‑128 (MQ=255)                       ctgtaggcgcaactcagcgcagcttctcaagcatctggtaataccacatccccgccgccagcagcgggttccccagcaagtcccccaTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATg                                                                                                                                                      <  1:133622‑M1/41‑1 (MQ=255)                        ccAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCgct                                                                                                                               >  1:317195/1‑150 (MQ=255)                                   cGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGcggcgg                                                                                                                    <  2:317195/150‑1 (MQ=255)                                           ctcatTGCCACCAGCCACATCATGGGCGAGATCATGGCCGACGGGTTTGGAGCAACCCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTgg                                                                                                            <  2:13148/148‑1 (MQ=255)                                              atTGCCACCAGCCACATCATGGGCGACATGATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTag                                                                                                         >  1:13148/1‑149 (MQ=255)                                                  ccaccaGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTAcc                                                                                                     <  2:205592/150‑1 (MQ=255)                                                   caccaGCCACATCATCGGCGCGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCAGGTACAGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCa                                                                                                    >  2:13892/1‑150 (MQ=255)                                                                  gggCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCt                                                                                     >  2:88420/1‑150 (MQ=255)                                                                        gaTCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTg                                                                               >  1:22851/1‑150 (MQ=255)                                                                        gaTCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTg                                                                               >  1:22852/1‑150 (MQ=255)                                                                            aTGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGtt                                                                           >  2:33197/1‑150 (MQ=255)                                                                              ggCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTgc                                                                         <  2:22851/150‑1 (MQ=255)                                                                              ggCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTgc                                                                         <  2:22852/150‑1 (MQ=255)                                                                              ggCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTgc                                                                         <  1:271326/150‑1 (MQ=255)                                                                                          gACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGAc                                                             <  1:41606/150‑1 (MQ=255)                                                                                             cGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCgct                                                                                                                               >  1:439880/1‑81 (MQ=255)                                                                                             cGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCgct                                                                                                                               <  2:439880/81‑1 (MQ=255)                                                                                               ggACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTcac                                                         >  2:229693/1‑149 (MQ=255)                                                                                               ggACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTcac                                                         <  1:229693/149‑1 (MQ=255)                                                                                                gACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACaa                                                       <  1:33197/150‑1 (MQ=255)                                                                                                cagcaagtcccccatcggcacccgcacatgcctgcactgggcgaaggtgtcgaTGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACaa                                                       >  2:188407‑M2/54‑150 (MQ=255)                                                                                                            catcggcacccgcacatgcctgcactgggcgaaggtgtcgaTGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAg                                                                 <  1:133622‑M2/87‑1 (MQ=255)                                                                                                            catcggcacccgcacatgcctgcactgggcgaaggtgtcgaTGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAg                                                                 >  2:133622‑M2/42‑128 (MQ=255)                                                                                                             ttCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACgg                                          >  1:455556/1‑150 (MQ=255)                                                                                                                          cccAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTa                                                                    <  1:271024/111‑1 (MQ=255)                                                                                                                          cccAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTa                                                                    >  2:271024/1‑111 (MQ=255)                                                                                                                                       tgtgCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTtgt                <  1:308077/150‑1 (MQ=255)                                                                                                                                                   gaTGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAggg    >  1:119711‑M2/3‑150 (MQ=255)                                                                                                                                                     tGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGgc  <  2:81620/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      CTGTCGGACAACGTGTGGTACTGCCAGGGTTACTCGGGGCATGGCATTGCCACCAGCCACATCATGGGCGAGATCATGGCCGAAGCGTTGACCGGGACGCTGGAGAAGTTCGACACCTTCGCCCAGTGCAGGCATGTGCGGGTGCCGATGGGGGACTTGCTGGGGAACCCGCTGCTGGCGGCGGGGATGTGGTATTACCAGATGCTTGAGAAGCTGCGCTGAGTTGCGCCTACAGGGACTCACAATGTCTGAAGACGGCGCCGCATCTTATTGTGGGGCCTTGTGTCGCGAAAGGGGC  >  NC_002947/5170906‑5171203

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.