New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2444395 =	21 (0.700)	5 (0.180)	5/264	2.9	21.4%	coding (224/234 nt)	PP_2141	hypothetical protein
	?	NC_002947	2444416 =	17 (0.600)					intergenic (+11/+40)	PP_2141/sulA	hypothetical protein/cell division inhibitor SulA

GCTGGCTGGGCAACGTCAATGCCGCTGCACGCCAACAACTGCTACGTGCAGCCAGTGCCGGAAATGCACAAAGCCTGAACATCCGCCTCGGCTGATGTTCAGGCTTTGCCTGTCACTTCAAATAGCCTGATACGCTGCTGCACACTCAGTGCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2444550‑2444395 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcagcaGCGTATCAGGCTATTTGAAGTGACAGGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGTGCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGT  >  NC_002947/2444416‑2444562                                                                                                                                                                                                                                                                                                                 GCTGGCTGGGCAACGTCAATGCCGCTGCACGCCAACAACTGCTACGTGCAGCCAGTGCCGGAAATACACAAAGCCTGAACATCCGCCTCGGCTGATGTTCAGGCTTTGCCTGTCACTTCAAATAGCCTGATACGCTGCTGCACACTCAGT                                                                                                                                                           <  2:358915/150‑1    GGCTGGGCAACGTCAATGCCGCTGCACGCCAACAACTGCTACGTGCAGCCAGTGCCGGAAATGCACAAAGCCTGAACATCCGCCTCGGCTGATGTTCAGGCTTTGCCTGTCACTTCAAATAGCCTGATACGCTGCTGCACACTCAGTGCA                                                                                                                                                        >  1:304085/1‑150         GGCAACGTCAATGCCGCTGCACGCCAACAACTGCTACGTGCAGCTAGTGCCCGAAATGCACAAAGCATGAACATCCGCCTCGGCTGATGTTCAGGCTTTGCCTGTCACTTCAAATAGCCTGATACGTTGCTGCACACTCAGTGCAGCAGC                                                                                                                                                   <  1:320076/150‑1                                                                    ACAAAGCCTGAACATCCGCCTCGGCTGATGTTCAGGCTTTGCCTGTCACTTCAAATAGCCTGATACGCTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAA                                                                                                                                  >  1:59187/1‑108                                                                    ACAAAGCCTGAACATCCGCCTCGGCTGATGTTCAGGCTTTGCCTGTCACTTCAAATAGCCTGATACGCTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAA                                                                                                                                  <  2:59187/108‑1                                                                                           GCTGATGTTCAGGCTTTGCCTGTCACTTCAAATAGCCTGATACGCTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAG                                                                                                                                 <  1:628316/86‑1                                                                                           GCTGATGTTCAGGCTTTGCCTGTCACTTCAAATAGCCTGATACGCTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAG                                                                                                                                 >  2:628316/1‑86                                                                                                                                                          GCAGCGTATCAGGCTATTTGAAGTGACAGGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGTGCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGT  <  2:201162/150‑1                                                                                                                                                                                                                                                                                                                 GCTGGCTGGGCAACGTCAATGCCGCTGCACGCCAACAACTGCTACGTGCAGCCAGTGCCGGAAATGCACAAAGCCTGAACATCCGCCTCGGCTGATGTTCAGGCTTTGCCTGTCACTTCAAATAGCCTGATACGCTGCTGCACACTCAGTGCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2444550‑2444395 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcagcaGCGTATCAGGCTATTTGAAGTGACAGGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGTGCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGT  >  NC_002947/2444416‑2444562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.