New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4055050 = | 26 (0.870) | 7 (0.240) | 6/270 | 2.7 | 21.2% | coding (237/393 nt) | PP_3574 | hypothetical protein |
? | NC_002947 | 4055078 = | 27 (0.940) | coding (265/393 nt) | PP_3574 | hypothetical protein |
GCTGATCGGGAACCACGGCGATCACGTCGATCTCCATCAGCCACTCGGCCTGGGCCAACCCGGCCACCACCAACCCGGTGGAAATCGGGAACACGCCCTTGAGCCACTTGCCCACCTCCTTGTACACCGGCTCGCGGAAGCGCGGGTCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4055201‑4055050 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtgTACAAGGAGGTGGGCAAGTGGCTCAAGGGCGTGTTCCCGATTTCCACCGGGTTGGTGGTGGCCGGGTTGGCCCAGGCCGAGTGGCTGATGGAGATCGACGTGATCGCCGTGGTTCCCGATCAGCAATGACCGCAGGCCTGAATGGCG > NC_002947/4055078‑4055224 GCTGATCGGGAACCACGGCGATCACGTCGATCTCCATCAGCCACTCGGCCTGGGCCAACCCGGCCACCACCAACCCGGTGGAAATCGGGAACACGCCCTTGAGCCACTTGCCCACCTCCTTGTACACCGGCTCGCGGAAGCGCGGGTCGG > 1:601783/1‑150 CTGATCGGGAACCACGGCGATCACGTCGATCTCCATCAGCCACTCGGCCTGGGCCAACCCGGCCACCACCAACCCGGTGGAAATCGGGAACACGCCCTTGAGCCACTTGCCCACCTCCTTGTACACCGGCTCGCGGAAGCGCGGGTCGGT < 2:601783/150‑1 TGATCGGGAACCACGGCGATCACGTCGATCTCCATCAGCCACTCGGCCTGGGCCAACCCGGCCACCACCAACCCGGTGGAAATCGGGAACACGCCCTTGAGCCACTTGCCCACCTCCTTGTACACCGGCTCGCGGAAGCGCGGGTCGGTG > 1:425044/1‑150 CGGCGATCACGTCGATCTCCATCAGCCACTCGGCCTGGGCCAACCCGGCCACCACCAACCCGGTGGAAATCGGGAACACGCCCTTGAGCCACTTGCCCACCTCCTTGTACACCGACCCGCGCTTCCGCGAGCCGGTGTACAAGGAGGTGG < 1:256653/150‑1 ACTCGGCCTGGGCCAACCCGGCCACCACCAACCCGGTGGAAATCGGGAACACGCCCTTGAGCCACTTGCCCACCTCCTTGTACACCGACCCGCGCTTCCGCGAGCCGGTGTACAAGGAGGTG > 1:484168/1‑122 ACTCGGCCTGGGCCAACCCGGCCACCACCAACCCGGTGGAAATCGGGAACACGCCCTTGAGCCACTTGCCCACCTCCTTGTACACCGACCCGCGCTTCCGCGAGCCGGTGTACAAGGAGGTG < 2:484168/122‑1 ACCGGCTCGCGGAAGCGCGGGTCGGTGTACAAGGAGGTGGGCAAGTGGCTCAAGGGCGTGTTCCCGATTTCCACCGGGTTGGTGGTGGCCGGGTTGGCCCAGGCCGAGTGGCTGATGGAGATCGACGTGATCGCCGTGGTTCCCGATCAG > 2:124517/1‑150 ACCGGCTCGCGGAAGCGCGGGTCGGTGTACAAGGAGGTGGGCAAGTGGCTCAAGGGCGTGTTCCCGATTTCCACCGGGTTGGTGGTGGCCGGGTTGGCCCAGGCCGAGTGGCTGATGGAGATC < 1:675887/123‑1 ACCGGCTCGCGGAAGCGCGGGTCGGTGTACAAGGAGGTGGGCAAGTGGCTCAAGGGCGTGTTCCCGATTTCCACCGGGTTGGTGGTGGCCGGGTTGGCCCAGGCCGAGTGGCTGATGGAGATC > 2:675887/1‑123 TCGCGGAAGCGCGGGTCGGTGTACAAGGAGGTGGGCAAGTGGCTCAAGGGCGTGTTCCCGATTTCCACCGGGTTGGTGGTGGCCGGGTTGGCCCAGGCCGAGTGGCTGATGGAGATCGACGTGATCGCCGTGGTTCCCGATCAGCAATGA < 2:256653/150‑1 GTGTACAAGGAGGTGGGCAAGTGGCTCAAGGGCGTGTTCCCGATTTCCACCGGGTTGGTGGTGGCCGGGTTGGCCCAGGCCGAGTGGCTGATGGAGATCGACGTGATCGCCGTGGTTCCCGATCAGCAATGACCGCAGTCCTGAATGGCG < 1:3014/150‑1 GCTGATCGGGAACCACGGCGATCACGTCGATCTCCATCAGCCACTCGGCCTGGGCCAACCCGGCCACCACCAACCCGGTGGAAATCGGGAACACGCCCTTGAGCCACTTGCCCACCTCCTTGTACACCGGCTCGCGGAAGCGCGGGTCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4055201‑4055050 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtgTACAAGGAGGTGGGCAAGTGGCTCAAGGGCGTGTTCCCGATTTCCACCGGGTTGGTGGTGGCCGGGTTGGCCCAGGCCGAGTGGCTGATGGAGATCGACGTGATCGCCGTGGTTCCCGATCAGCAATGACCGCAGGCCTGAATGGCG > NC_002947/4055078‑4055224 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |