| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 73699 = | 47 (1.040) | 4 (0.090) | 4/244 | NT | 8.0% | coding (175/888 nt) | PP_0063 | lipid A biosynthesis lauroyl acyltransferase |
| ? | NC_002947 | 73721 = | 46 (1.040) | coding (197/888 nt) | PP_0063 | lipid A biosynthesis lauroyl acyltransferase | |||||
GACAAAGGATTTACCGATATCCCGCAGCGCCTGGCCCACCAGTTGCTCACGGGCAACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/73758‑73699‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggTGGGCCAGGCGCTGCGGGATATCGGTAAATCCTTTGTCGAAAGTGCCTGTGCCTGGATCTGGCCGCCGCAACGCTCGCTGGAGCTGGTCAAGGAAGTGCATGGCCTGGAAGTGCTGGAGCAGGCCCTGGCCTCGGGTAAAGGCGTGGTC > NC_002947/73721‑73869 GACAAAGGATTTACCGATATCCCGCAGCGCCTGGCCCACCGGTTGCCCGTGAGCAACTGGTGGGCCAGGCGCTGCGGGATATCGGTAAATCCTTT > 1:750681/1‑95GACAAAGGATTTACCGATATCCCGCAGCGCCTGGCCCACCGGTTGCCCGTGAGCAACTGGTGGGCCAGGCGCTGCGGGATATCGGTAAATCCTTT < 2:750681/95‑1 CCACCAGTTGCTCACGGGCAACCGGTGGGCCAGGCGCTGCGGGATATCGGTAAATCCTT > 1:118270/1‑59 CCACCAGTTGCTCACGGGCAACCGGTGGGCCAGGCGCTGCGGGATATCGGTAAATCCTT < 2:118270/59‑1 GTGGGCCAGGCGCTGCGGGATATCGGTAAATCCTTTGTCGAAAGTGCCTGTGACTGAATCTGGCCGCCGCAACGCTCGCTGGAGCTGGTCAAGGAAGTGCATGGCCTGGAAGTGCTGGAGCAGGCCCTGGCCTCGGGTAAAGGCGTGGTC > 1:1052911/1‑150 GACAAAGGATTTACCGATATCCCGCAGCGCCTGGCCCACCAGTTGCTCACGGGCAACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/73758‑73699‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggTGGGCCAGGCGCTGCGGGATATCGGTAAATCCTTTGTCGAAAGTGCCTGTGCCTGGATCTGGCCGCCGCAACGCTCGCTGGAGCTGGTCAAGGAAGTGCATGGCCTGGAAGTGCTGGAGCAGGCCCTGGCCTCGGGTAAAGGCGTGGTC > NC_002947/73721‑73869 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |