| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 324741 | 30 (0.660) | 6 (0.140) | 6/234 | NT | 16.1% | coding (25/1320 nt) | oprQ | outer‑membrane porin D |
| ? | NC_002947 | = 324766 | 34 (0.800) | coding (50/1320 nt) | oprQ | outer‑membrane porin D | |||||
TGCCAAGGGCCGCCGTGAAATTACCGGTCGGCCCACCCGGCTGGATCCGCATAGCGTCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/324586‑324741‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcctggGTCGCGGCGATCATCGCCAGGGCGACCAGGCTGATCCTGGTTTTCAACATGTTGTTTTCCTTATTTCTTAATCAAAAACGCGCTGCAATATGACGCCAGGAACCAACGCCCCTTCGTAGGTTCGACGCTATGCGGATCCAGCCGGGTG < NC_002947/324766‑324619 TGCCAAGGGCCGCCGTGAAATTACCGGTCGGCCCACCCGGCTGGATCCGCATAGCGTCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCA > 1:273289/1‑150 CCAAGGGCCGCCGTGAAATTACCGGTCGGCCCACCCGGCTGGATCCGCATAGCGTCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGC < 1:98076/150‑1 CCAAGGGCCGCCGTGAAATTACCGGTCGGCCCACCCGGCTGGATCCGCATAGCGTCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGC > 2:512225/1‑150 CCAAGGGCCGCCGTGAAATTACCGGTCGGCCCACCCGGCTGAATCCGCATAGCGTCGAACCTACGAAGGGGAGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGC > 1:1146513/1‑150 CCGGCTGGATCCGCATAGCGTCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGGTCGCGGCGATCATCGCCAGGGCGACCAGG < 1:601995/150‑1 CCGGCTGGATCCGCATAGCGTCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGGTCGCGGCGATCATCGCCAGGGCGACCAGG > 2:601995/1‑150 TTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGGTCGCGGCGATCATCGCCAGGGCGACCAGGCTGATCCTGGT > 1:599337/1‑122 TTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGGTCGCGGCGATCATCGCCAGGGCGACCAGGCTGATCCTGGT < 2:599337/122‑1 TTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATGAGCCTGGGTCGCGGCGATCATCGCCAGGGCGACCA < 1:841808/105‑1 TTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATGAGCCTGGGTCGCGGCGATCATCGCCAGGGCGACCA > 2:841808/1‑105 GGGTCGCGGCGATCATCGCCAGGGCGACCAGGCTGATCCTGGGTTTCAACATGTTGTTTTCCTTATTTCTTAATCAAAAACGCGCTGCAATATGACGCCAGGAACCAACGCCCCTTCGTAGGTTCGACGCTATGCGGATCCAGCCGGGTG > 1:1136129/1‑150 TGCCAAGGGCCGCCGTGAAATTACCGGTCGGCCCACCCGGCTGGATCCGCATAGCGTCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/324586‑324741‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcctggGTCGCGGCGATCATCGCCAGGGCGACCAGGCTGATCCTGGTTTTCAACATGTTGTTTTCCTTATTTCTTAATCAAAAACGCGCTGCAATATGACGCCAGGAACCAACGCCCCTTCGTAGGTTCGACGCTATGCGGATCCAGCCGGGTG < NC_002947/324766‑324619 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |