| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 324741 | 30 (0.660) | 6 (0.140) | 6/234 | NT | 16.1% | coding (25/1320 nt) | oprQ | outer‑membrane porin D |
| ? | NC_002947 | = 324766 | 34 (0.800) | coding (50/1320 nt) | oprQ | outer‑membrane porin D | |||||
GCCGCCGTGAAATTACCGGTCGGCCCACCCGGCTGGATCCGCATAGCGTCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATGGCACCGACGACCAGATCGAA > NC_002947/324594‑324890 | gccgccGTGAAATTACCGGTCGGCCCACCCGGCTGGATCCGCATAGCGTCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTc > 1:443646/1‑150 (MQ=255) aCCGGTCGGCACACACGGCTGGATCCGCATAGCGTCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCgatgat < 1:248343/150‑1 (MQ=255) cACCCGGCTGGATCCGCATAGCGTCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAACCCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACcc > 1:1136129‑M2/1‑148 (MQ=255) ccGGCTGGATCCGCATAGCGTCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGgtcgcggcgatcatcgccagggcgaccagg > 2:601995‑M1/1‑120 (MQ=255) ccGGCTGGATCCGCATAGCGTCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGgtcgcggcgatcatcgccagggcgaccagg < 1:601995‑M1/150‑31 (MQ=255) aGCGTCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCa < 1:498115/150‑1 (MQ=255) tCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCt > 2:1193970/1‑150 (MQ=255) gAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGa < 1:1193970/150‑1 (MQ=255) gAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAAAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGa < 2:478999/150‑1 (MQ=255) aCCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACa < 2:371543/150‑1 (MQ=255) cTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAgg < 2:447542/142‑1 (MQ=255) cTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAgg > 1:447542/1‑142 (MQ=255) cGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAg < 2:443646/150‑1 (MQ=255) aaGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACCCGATGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAggg < 1:75590/150‑1 (MQ=255) ggCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTc < 1:825747/150‑1 (MQ=255) ttGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGgtcgcggcgatcatcgccagggcgaccaggctgatcctggt > 1:599337‑M1/1‑81 (MQ=255) ttGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGgtcgcggcgatcatcgccagggcgaccaggctgatcctggt < 2:599337‑M1/122‑42 (MQ=255) tGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGa < 1:512225/150‑1 (MQ=255) ggTTCCTGGCGTCATATTGCAGCGCGTTTTTGCTTAAGAAACAGAAGAAACAACATGTTGAAAACCAGGATCAGCTTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAg < 1:569852/150‑1 (MQ=255) gTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAgg > 2:1134316/1‑150 (MQ=255) ttCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATGAGCCTGGgtcgcggcgatcatcgccagggcgacca < 1:841808‑M1/105‑29 (MQ=255) ttCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATGAGCCTGGgtcgcggcgatcatcgccagggcgacca > 2:841808‑M1/1‑77 (MQ=255) cTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAg < 2:1142346/109‑1 (MQ=255) cTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAg > 1:1142346/1‑109 (MQ=255) gTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACg < 2:703355/150‑1 (MQ=255) tatTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCAc > 1:226880/1‑145 (MQ=255) tatTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCAc < 2:226880/145‑1 (MQ=255) gcgTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCg > 1:253063/1‑125 (MQ=255) gcgTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCg < 2:253063/125‑1 (MQ=255) gcgTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCAGCGAGGACAGTCACGTCAACGTCCTTCt < 2:273289/150‑1 (MQ=255) taTTAACAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGTGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACg < 2:855505/149‑1 (MQ=255) ttAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGcc > 1:712127/1‑150 (MQ=255) aGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCaa < 2:131103/94‑1 (MQ=255) aGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCaa > 1:131103/1‑94 (MQ=255) ggAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCACCGCCTACATCAACCg > 2:43470/1‑150 (MQ=255) aacaTGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACaag > 2:914006/1‑150 (MQ=255) aCCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACccaggctgatcctggttttcaacatgttgttttccttatttcttaatcaaaaacgcgctgcaatatgacgccaggaaccaa < 2:599337‑M2/122‑82 (MQ=255) aCCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACccaggctgatcctggttttcaacatgttgttttccttatttcttaatcaaaaacgcgctgcaatatgacgccaggaaccaa > 1:599337‑M2/1‑41 (MQ=255) cAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATGGCACcga > 2:614356/1‑150 (MQ=255) gCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAGGAAGCATGGCACCGACGACCAGa > 1:473177/1‑150 (MQ=255) ccTGGTCGCCCTGGCGATGATCGCCGCGACccaggctgatcctggttttcaacatgttgttttccttatttcttaatcaaaaacgcgctgcaatatgacgccaggaaccaacgccccttcgtaggttcgacgctatgcggatccagccgg < 1:601995‑M2/150‑121 (MQ=255) ccTGGTCGCCCTGGCGATGATCGCCGCGACccaggctgatcctggttttcaacatgttgttttccttatttcttaatcaaaaacgcgctgcaatatgacgccaggaaccaacgccccttcgtaggttcgacgctatgcggatccagccgg > 2:601995‑M2/1‑30 (MQ=255) tGGTCGCCCTGGCGATGATCGCCGCGACccaggctcatcctggttttcaacatgttgttttccttatttcttaatcaaaaacgcgctgcaatatgacgccaggaa < 1:841808‑M2/105‑78 (MQ=255) tGGTCGCCCTGGCGATGATCGCCGCGACccaggctcatcctggttttcaacatgttgttttccttatttcttaatcaaaaacgcgctgcaatatgacgccaggaa > 2:841808‑M2/1‑28 (MQ=255) gggtcgcggcgatcatcgccagggcgaccaggctgatcctgggtttcaacatgttgttttccttatttcttaatcaaaaacgcgctgcaatatgacgccaggaaccaacgccccttcgtaggttcgacgctatgcggatccagccgggtg > 1:1136129‑M1/1‑2 (MQ=255) gTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATGGCACCGACGACCAGATCGaa > 2:817806/1‑150 (MQ=255) | GCCGCCGTGAAATTACCGGTCGGCCCACCCGGCTGGATCCGCATAGCGTCGAACCTACGAAGGGGCGTTGGTTCCTGGCGTCATATTGCAGCGCGTTTTTGATTAAGAAATAAGGAAAACAACATGTTGAAAACCAGGATCAGCCTGGTCGCCCTGGCGATGATCGCCGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATGGCACCGACGACCAGATCGAA > NC_002947/324594‑324890 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |