| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 345300 = | 31 (0.690) | 3 (0.070) | 3/234 | NT | 9.1% | coding (306/1068 nt) | mutY | A/G‑specific adenine glycosylase |
| ? | NC_002947 | 345333 = | 31 (0.730) | coding (273/1068 nt) | mutY | A/G‑specific adenine glycosylase | |||||
CTTCGACCGCTTCATGCAGGCCCTGCCAACGGTGCAAGCCCTGGCCGAGGCACCGGAGGACGAAGTGCTGCACCTGTGGACGGGCCTTGGCTACTACACCCGCGCACGCAACCTGCAAAAGGCCGCCAAGGTCGTCGTCGAGCAACATGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/345453‑345300‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcggcCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCCACAGGTGCAGCACTTCGTCCTCCGGTGCCTCGGCCAGGGCTTGCACCGTTGGCAGGGCCTGCATGAAGCGGTCGAAGTAATTGAGCACGGTGCTGACCTGGGT > NC_002947/345333‑345479 CTTCGACCGCTTCATGCAGGCCCTGCCAACGGTGCAAGCCCTGGCCGAGGCACCGGAGGACGAAGTGCTGCACCTGTGGACGGGCCTTGGCTACTACACCCGCGCACGCAACCTGCAAAAGGCCGCCAAGGTCGTCGTCGAGCAACATGG > 1:531054/1‑150CTTCGACCGCTTCATGCAGGCCCTGCCAACGGTGCAAGCCCTGGCCGAGGCACCGGAGGACGAAGTGCTGCACCTGTGGACGGGCCTTGGCTACTACACCCGCGCACGCAACCTGCAAAAGGCCGCCAAGGTCGTCGTCGAGCAACATGG > 2:106348/1‑150 TTCGACCGCTTCATGCAGGCCCTGCCAACGGTGCAAGCCCTGGCCGAGGCACCGGAGGACGAAGTGCTGCACCTGTGGACGGGCCTTGGCTACTACACCCGCGCACGCAACCTGCAAAAGGCCGCCAAGGTCGTCGTCGAGCAACATGGC < 1:437099/150‑1 TTCGACCGCTTCATGCAGGCCCTGCCAACGGTGCAAGCCCTGGCCGAGGCACCGGAGGACGAAGTGCTGCACCTGTGGACGGGCCTTGGCTACTACACCCGCGCACGCAACCTGCAAAAGGCCGCCAAGGTCGTCGTCGAGCAACATGGC > 2:383153/1‑150 TTCGACCGCTTCATGCAGGCCCTGCCAACGGTGCAAGCCCCGGCCGAGGCACCGGAGGACGAAGTGCTGCACCTGTGGACGGGCGTTGGCTACGACACCCGCGCACGCAACCTGCAAAAGGCCGCCAAGGTCGTCGCGGATCAACATGGC > 1:1151282/1‑150 CCGCGCACGCAACCTGCAAAAGGCCGCCAAGGTCGTCGTCGAGCAACATGGCGGC < 1:1152554/55‑1 CCGCGCACGCAACCTGCAAAAGGCCGCCAAGGTCGTCGTCGAGCAACATGGCGGC > 2:1152554/1‑55 TGCAAAAGGCCGCCAAGGTCGTCGTCGAGCAACATGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCCACAGGTGCAGCACTTCGTCCTCCGGTGCCTCGGCCAGGGGTTGCACCGTTGGCAGGGCCTGCATG > 1:170393/1‑150 CAAGGTCGTCGTCGAGCAACATGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCCACAGG > 1:1107276/1‑77 CAAGGTCGTCGTCGAGCAACATGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCCACAGG < 2:1107276/77‑1 GCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCCACAGGTGCAGCACTTCGTCCTCCGGTGCCTCGGCCAGGGCTTGCACCGTTGGCAGGGCCTGCATGAAGCGGTCGAAGTAATTGAGCACGGTGCTGACCTGG < 1:418422/150‑1 GGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCCACAGGTGCAGCACTTCGTCCTCCGGTGCCTCGGCCAGGGCTTGCACCGTTGGCAGGGCCTGCATGAAGCGGTCGAAGTAATTGAGCACGGTGCTGACCTGGGT > 2:729709/1‑150 CTTCGACCGCTTCATGCAGGCCCTGCCAACGGTGCAAGCCCTGGCCGAGGCACCGGAGGACGAAGTGCTGCACCTGTGGACGGGCCTTGGCTACTACACCCGCGCACGCAACCTGCAAAAGGCCGCCAAGGTCGTCGTCGAGCAACATGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/345453‑345300‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcggcCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCCACAGGTGCAGCACTTCGTCCTCCGGTGCCTCGGCCAGGGCTTGCACCGTTGGCAGGGCCTGCATGAAGCGGTCGAAGTAATTGAGCACGGTGCTGACCTGGGT > NC_002947/345333‑345479 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |