New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	345300 =	31 (0.690)	3 (0.070)	3/234	NT	9.1%	coding (306/1068 nt)	mutY	A/G‑specific adenine glycosylase
	?	NC_002947	345333 =	31 (0.730)					coding (273/1068 nt)	mutY	A/G‑specific adenine glycosylase

CTGGGCGGTGTAGCGTGCCAGCACGCGCTTGACGTTGCCGTCGAGGATCGGTGCGCGGATGCCCATGCTGATGCTGGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCCACAGGTGCAGCACTTCGTCCTCCGGTGCCTCGGCCAGGGCTTGCACCGTTGGCAGGGCCTGCATGAAGCG  >  NC_002947/345153‑345446                                                                                                                                                    |                                                                                                                                                   acccaggtcagcaccgtgctcaattacttcgaccgcttcatgcaggccctgccaacggtgcaagccctggccgaggcaccggaggacgaagtgctgcacctgtggacgggccttggctactacacccgcgcacgcaacctgcaaaaggcc                                                                                                                                                  >  2:729709‑M1/148‑150 (MQ=255)   ccaggtcagcaccgtgctcaattacttcgaccgcttcatgcaggccctgccaacggtgcaagccctggccgaggcaccggaggacgaagtgctgcacctgtggacgggccttggctactacacccgcgcacgcaacctgcaaaaggccgc                                                                                                                                                <  1:418422‑M1/5‑1 (MQ=255)          agcgCGTGCTGGCACGCGCTTGACGTTGCCGTCGAGGATCGGTGCGCGGATGCCCATGCTGATGCTGGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTg                                                                                                                                         >  1:767427/4‑150 (MQ=255)             gCGTGCCAGCACGCGCTTGACGTTGCCGTCGAGGATCGGTGCGCGGATGCCCATGCTGAGGCTGGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTc                                                                                                                                      <  1:920128/150‑1 (MQ=255)                     gCATGCGCTTGACGTTGCCGTCGAGGATCGGTGCGCGGATGCCCATGCTGATGCTGGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTcgacgacga                                                                                                                              <  1:505050/150‑1 (MQ=255)                           gcTTGACGTTGCCGTCGAGGATCGGTGCGCGGATGCCCATGCTGATGCTGGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTgg                                                                                                                        >  1:692284/1‑150 (MQ=255)                            cTTGACGTTGCCGTCGAGGATCGGTGCGCGGATGCCCATGCTGATGCTGGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTggc                                                                                                                       <  2:881320/150‑1 (MQ=255)                             ttGACGTTGCCGTCGAGGATCGGTGCGCGGATGCCCATGCTGATGCTGGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTggcg                                                                                                                      <  2:122279/150‑1 (MQ=255)                                       catgcaggccctgccaacggtgcaacccctggccgaggcaccggaggacgaagtgctgcacctgtggacgggccttggctactacacccgcgcacgcaacctgcaaaagGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCa                                                                                                            >  1:170393‑M1/110‑150 (MQ=255)                                                        cgGATGCCCATGCTGATGCTGGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGTCCTTTTGCAGGTTGCGTGCGCGGgtg                                                                                           >  2:152462/1‑150 (MQ=255)                                                               ccATGCTGATGCTGGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGc                                                                                    <  2:731189/150‑1 (MQ=255)                                                                 atgctgatgctgGCGATGGCGCCGGCAGTGGAGCGGCCAATGCGGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCa                                                                                  >  1:535117/1‑150 (MQ=255)                                                                 atgctgatgctgGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCa                                                                                  >  1:383153/1‑150 (MQ=255)                                                                  tgctgatgctgGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCaa                                                                                 >  1:35807/1‑150 (MQ=255)                                                                       atgctgGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGccc                                                                            <  2:692284/150‑1 (MQ=255)                                                                        tgctgGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCg                                                                           >  1:446502/1‑150 (MQ=255)                                                                           tgGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTcc                                                                        >  1:255977/1‑150 (MQ=255)                                                                             gCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCcac                                                                      <  1:100246/150‑1 (MQ=255)                                                                               gATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTNCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTtgcgtgc                                                                                                  >  1:556604/1‑120 (MQ=255)                                                                               gATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTtgcgtgc                                                                                                  <  2:556604/120‑1 (MQ=255)                                                                                 tGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCCACAGGt                                                                  >  1:614896/1‑150 (MQ=255)                                                                                           aGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCCACAGGTGCAGCACTTc                                                        <  2:35807/150‑1 (MQ=255)                                                                                              ggAGCGGCCAATGCGGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCCACAGGTGCAGCACTTCGtc                                                     <  2:535117/150‑1 (MQ=255)                                                                                                aGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCCACAGGTGGAGCACTTCGtcct                                                   >  1:88058/1‑150 (MQ=255)                                                                                                 gCGGCCAATGCCAGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTCCGTCCGCAGATCTACTAGCAAAAGCCTGACCTCAGGTGCAGCACTTCGtcctc                                                  >  2:734917/1‑150 (MQ=255)                                                                                                   cctgtggacgggccttggctactacacccgcgcacgcaacctgcaaaagGCCGCCATGTTGCTCGACGACGACCTTg                                                                                                                         <  2:1107276‑M1/28‑1 (MQ=255)                                                                                                   cctgtggacgggccttggctactacacccgcgcacgcaacctgcaaaagGCCGCCATGTTGCTCGACGACGACCTTg                                                                                                                         >  1:1107276‑M1/50‑77 (MQ=255)                                                                                                     ccAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCCACAGGTGCAGCACTTCGTCCTCCGGt                                              <  1:152462/150‑1 (MQ=255)                                                                                                         tGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCCACAGGTgcag                                                              <  2:383745/130‑1 (MQ=255)                                                                                                         tGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCCACAGGTgcag                                                              >  1:383745/1‑130 (MQ=255)                                                                                                           ccGGGCAGCGCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCCACAGGTGCAGCACTTCGTCCTCCGGTGCCTCg                                        >  2:392793/1‑150 (MQ=255)                                                                                                                          aGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCCACAGGTGCAGCACTTCGTCCTCCGGTGCCTCGGCCATGGcctgggcg                         <  2:446502/150‑8 (MQ=255)                                                                                                                             tgctCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCCACAGGTGCAGCAATCCGTCCTCCGGTGCCTCGGCCAGGGCTTGCACCGtt                      <  1:698712/150‑1 (MQ=255)                                                                                                                                          gcgGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAg                                                                                                           >  2:529745/1‑52 (MQ=255)                                                                                                                                          gcgGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAg                                                                                                           <  1:529745/52‑1 (MQ=255)                                                                                                                                           cgGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCCACAGGTGCAGCACTTCGTCCTCCGGTGCCTCGGCCAGGGCTTGCACCGTTGGCAGGGCCTGCAt        <  2:255977/150‑1 (MQ=255)                                                                                                                                                aTTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGAGCGGGTGTAGTAGCCAAGGCCCGTCCACAGGTGCAGCACTTCGTCCTCCGGTGCCTCGGCCAGGGCTTGCACCGTTGGCAGGGCCTGCATGAAGc   <  2:523578/150‑1 (MQ=255)                                                                                                                                                 ttCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCCACAGGTGCAGCACTTCGTCCTCCGGTGCCTCGGCCAGGGCTTGCACCGTTGGCAGGGCCTGCATGAAGCg  >  1:106348/1‑150 (MQ=255)                                                                                                                                                    GCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCgg                                                                                              >  2:1152554‑M1/1‑55 (MQ=255)                                                                                                                                                    GCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCgg                                                                                              <  1:1152554‑M1/55‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                   CTGGGCGGTGTAGCGTGCCAGCACGCGCTTGACGTTGCCGTCGAGGATCGGTGCGCGGATGCCCATGCTGATGCTGGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCGTCCACAGGTGCAGCACTTCGTCCTCCGGTGCCTCGGCCAGGGCTTGCACCGTTGGCAGGGCCTGCATGAAGCG  >  NC_002947/345153‑345446

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.