New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1315819 =	49 (1.090)	3 (0.070)	3/236	NT	7.0%	coding (248/330 nt)	PP_1147	hypothetical protein
	?	NC_002947	1315855 =	33 (0.770)					coding (284/330 nt)	PP_1147	hypothetical protein

TCATGGGGTGGGCTCGACGATCAACAGAGAATTGCATGATGAAGCCAGGCGCAGGCGCTGACCAGCCCCGTATCAGACTTCGATGTCCACCAGCAGTCCTTGGCGTACATGCTCGCCCATCAATGGCGCTACCGGCACGGTGTTGTCGGCATTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1315973‑1315819 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cattgaTGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTGGTCAGCGCCTGCGCCTGGCTTCATCATGCAATTCTCTGTTGATCGTCGAGCC  >  NC_002947/1315855‑1315963                                                                                                                                                                                                                                                                          TCATGGGGTGGGCTCGACGATCAACAGAGAATTGCATGATGAAGCCAGGCGCAGGCGCTGACCAGCCCCGTATCAGACTTCGATGTCCACCAGCAGTCCTTGGCGTACATGCTCGCCCATCAATGGCGCTACCGGCACGGTGTTGTCGGC                                                                                                                    >  2:749970/1‑150                                                                                        CACCAGCAGTCCTTGGCGTACATGCTCGCCCATCAATGGCGCTACCGGCACGGTGTTGTCGGCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTGGTCA                                                  >  1:840229/1‑129                                                                                        CACCAGCAGTCCTTGGCGTACATGCTCGCCCATCAATGGCGCTACCGGCACGGTGTTGTCGGCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTGGTCA                                                  <  2:840229/129‑1                                                                                                                   GCCCATCAATGGCGCTACCGGCACGGTGTTGTCGGCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGCAGTGTGATACGGGGCTGGTCAGCGCCTGCGCCTGGCTTCATCATGCAAACCTCTGTTCATCATCtaact  >  1:74909/1‑145                                                                                                                                                                                                                                                                          TCATGGGGTGGGCTCGACGATCAACAGAGAATTGCATGATGAAGCCAGGCGCAGGCGCTGACCAGCCCCGTATCAGACTTCGATGTCCACCAGCAGTCCTTGGCGTACATGCTCGCCCATCAATGGCGCTACCGGCACGGTGTTGTCGGCATTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1315973‑1315819 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cattgaTGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTGGTCAGCGCCTGCGCCTGGCTTCATCATGCAATTCTCTGTTGATCGTCGAGCC  >  NC_002947/1315855‑1315963

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.