New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1315819 =	49 (1.090)	3 (0.070)	3/236	NT	7.0%	coding (248/330 nt)	PP_1147	hypothetical protein
	?	NC_002947	1315855 =	33 (0.770)					coding (284/330 nt)	PP_1147	hypothetical protein

CGCGACCCGCAGGAGCAGGTATTGTTGCTGCGCGATGAACAGCGCCGCCAGCAGCAACGCCGGAACAAGGGCGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTGGTCAGCGCCTGCGCCTGGCTTCATCATGCAATTCTCTGTTGATCGTCGAGCCCACCCCATGAGCCAAGAC  >  NC_002947/1315710‑1315981                                                                                                                                                  |                                                                                                                               agttagatgatgaacagaggtttgcatgatgaagccaggcgcaggcgctgaccagccccgtatcacactgcgatgtccaccagcagtccttggcgtacatgctcgcccaTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGc                                                                                                                            >  1:74909‑M1/110‑150 (MQ=255)           aGGAGCAGGTATTGTTGCTGCGCGATGAACAGCGCCGCCAGCAGCAACGCCGGAACAAGGGCGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTAc                                                                                                                  >  1:769418/1‑150 (MQ=255)                 aGGTATTGTTGCTGCGCGATGAACAGCGCCGCCAGCAGCAACGCCGGAACAAGGGCGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTTTCTGCCGACAACTCCTTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAg                                                                                                            <  1:328693/150‑1 (MQ=255)                    tATTGTTGCTGCGCGATGAACAGCGCCGCCAGCAGCAACGCCGGAACAAGGGCGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGAc                                                                                                         <  2:97700/150‑1 (MQ=255)                    tATTGTTGCTGCGCGATGAACAGCGCCGCCAGCAGCAACGCCGGAACAAGGGCGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGAc                                                                                                         <  2:314353/150‑1 (MQ=255)                                       aCAGCGCCGCCAGCAGCAACGCCGGAACACGGGCGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGt                                                                                      >  1:632032/1‑150 (MQ=255)                                             ccgccAGCAGCAACGCCGGAACAAGGGCGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATa                                                                                <  1:28521/150‑1 (MQ=255)                                             ccgccAGCAGCAACGCCGGAACAAGGGCGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATa                                                                                <  2:1109515/150‑1 (MQ=255)                                                tcagcagCAACGCCGGAACAAGGGCGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACgg                                                                             <  1:66256/149‑1 (MQ=255)                                                 tgaccagccccgtatcagacttcgatgtccaccagcagtccttggcgtacatgctcgcccaTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCtggtg                                                                                                 <  2:840229‑M1/68‑1 (MQ=255)                                                 tgaccagccccgtatcagacttcgatgtccaccagcagtccttggcgtacatgctcgcccaTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCtggtg                                                                                                 >  1:840229‑M1/62‑129 (MQ=255)                                                   gcagcaACGCCGGAACAAGGGCGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGc                                                                          <  2:769418/150‑1 (MQ=255)                                                     accaACGCCGGAACAAGGGCGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTg                                                                        <  1:831959/148‑1 (MQ=255)                                                        aaCGCCGGAACAAGGGCGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAg                                                                                                                         >  1:240030/1‑98 (MQ=255)                                                        aaCGCCGGAACAAGGGCGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAg                                                                                                                         <  2:240030/98‑1 (MQ=255)                                                           cccGGAACAAGGGCGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCTGACAACACCGTGCCAGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGCTAGACATCGAAGTCTGATACGGGGCTGGTCAgc                                                                  <  2:393453/149‑1 (MQ=255)                                                            ccGGAACAAGGGCGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAg                                                                                                            >  1:132633/1‑107 (MQ=255)                                                            ccGGAACAAGGGCGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAg                                                                                                            <  2:132633/107‑1 (MQ=255)                                                              ggAACAAGGGCGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTGGTCAgcgcc                                                               >  2:934088/1‑150 (MQ=255)                                                                     gggCGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAg                                                                                                            <  1:272893/98‑1 (MQ=255)                                                                     gggCGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAg                                                                                                            >  2:272893/1‑98 (MQ=255)                                                                      ggCGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAACGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTGGTCAGcgcctgcgcctg                                                       <  1:689352/150‑1 (MQ=255)                                                                        cGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTGGTCAGCGCCTGCGCCTGGc                                                     <  2:732820/150‑1 (MQ=255)                                                                           gCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTGGTCAGCGCCTGCGCCTGGCTtc                                                  <  1:764522/150‑1 (MQ=255)                                                                              caccagcagtccttggcgtacatgctcgcccatcaatggcgctaccggcacggtgttgtcggcattgaTGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTGGTCa                                                                    >  1:840229‑M2/69‑129 (MQ=255)                                                                              caccagcagtccttggcgtacatgctcgcccatcaatggcgctaccggcacggtgttgtcggcattgaTGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTGGTCa                                                                    <  2:840229‑M2/61‑1 (MQ=255)                                                                                     tACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTGGTCAGCGCCTGCGCCTGGCTTCATCATGCAAt                                        >  2:3624/1‑150 (MQ=255)                                                                                          ggCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTgg                                                                       <  1:674831/114‑1 (MQ=255)                                                                                          ggCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTgg                                                                       >  2:674831/1‑114 (MQ=255)                                                                                                   gggTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCAACAACGCCAAGGACTTCGAATGGACATCGAAGTCTGATACGGGGCTGGTCAGCGCCTGCGCCTGGCTTCATCATGCAATTCTCTGTTGAtcgt                          >  1:749970/1‑150 (MQ=255)                                                                                                   gggTGACGAGGGCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTGGTCAGCGCCTGCGCCTGGCTTCATCATGCAATTCTCTGTTGAtcgt                          <  1:934088/150‑1 (MQ=255)                                                                                                    ggTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTGGTCAGCGCCTGCGCCTGGCTtca                                                 <  1:433166/126‑1 (MQ=255)                                                                                                    ggTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTGGTCAGCGCCTGCGCCTGGCTtca                                                 >  2:433166/1‑126 (MQ=255)                                                                                                       gACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTGGTCAGCGCCTGCGCCTGGCTTCATCATGCAATTCTCTGTTGATCGTCGAg                      >  1:676056/1‑150 (MQ=255)                                                                                                         gcccatcaatggcgctaccggcacggtgttgtcggcattgaTGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGCAGTGTGATACGGGGCTGGTCAGCGCCTGCGCCTGGCTTCATCATGCAAACCTCtgttcatcatctaact                    >  1:74909‑M2/42‑145 (MQ=255)                                                                                                           aGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGGCATCGAAGTCTGATACGGGGCTGGTCAGCGCCTGCGCCTGGCTTCATCATGCAATTCTCTg                                  <  2:339778/134‑1 (MQ=255)                                                                                                           aGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGGCATCGAAGTCTGATACGGGGCTGGTCAGCGCCTGCGCCTGGCTTCATCATGCAATTCTCTg                                  >  1:339778/1‑134 (MQ=255)                                                                                                                   GCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTGGTCAGCGCCTGCGCCTGGCTTCATCATGCAATTCTCTGTTGATCGTCGAGCCCACCCCATGa          >  2:749970‑M1/1‑150 (MQ=255)                                                                                                                     cGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTGGTCAGCGCCTGCGCCTGGCTTCATCATGCAATTCTCTGTTGATCGTCGAGCCCACCCCATGAGc        >  2:642627/1‑150 (MQ=255)                                                                                                                           cacCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGCGGACATGGAAGTCTGATACGGGGCTGGTCAGCGCCTGCGCCTGGCTTCATCATGCAATTCTCTGTTGATCGTCGAGCCCACTTCGTGAGACAAGAc  >  1:56683/1‑150 (MQ=255)                                                                                                                                                  |                                                                                                                               CGCGACCCGCAGGAGCAGGTATTGTTGCTGCGCGATGAACAGCGCCGCCAGCAGCAACGCCGGAACAAGGGCGAGCAGGAACGCTACGAGGCCGTCCCGGGTGACGAGGTCAATGCCGACAACACCGTGCCGGTAGCGCCATTGATGGGCGAGCATGTACGCCAAGGACTGCTGGTGGACATCGAAGTCTGATACGGGGCTGGTCAGCGCCTGCGCCTGGCTTCATCATGCAATTCTCTGTTGATCGTCGAGCCCACCCCATGAGCCAAGAC  >  NC_002947/1315710‑1315981

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.