| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1409082 | 37 (0.820) | 12 (0.270) | 9/240 | NT | 25.1% | intergenic (+20/‑255) | PP_1230/nadA | hypothetical protein/quinolinate synthase iron‑sulfur cluster subunit |
| ? | NC_002947 | = 1409146 | 36 (0.820) | intergenic (+84/‑191) | PP_1230/nadA | hypothetical protein/quinolinate synthase iron‑sulfur cluster subunit | |||||
AGGGCGATGATGTGGTCAGCAGCCTGCACTATGCCGATGGCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1408932‑1409082‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccCCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCAACAGGAGAAACCATCACCCCTGCGGCGACAGGGCCCCCAGATGCGCCGCCATGAACATGGCAAATTCTTCAACGGTC < NC_002947/1409146‑1408999 AGGGCGATGATGTGGTCAGCAGCCTGCACTATGCCGATGGCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTAATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGC > 2:538106/1‑150 GAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGT < 1:235935/142‑1 GAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGT > 2:235935/1‑142 CGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCCCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAA > 1:385462/1‑143 CGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCCCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAA < 2:385462/143‑1 TTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCCCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGG > 1:1159130/1‑128 TTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCCCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGG < 2:1159130/128‑1 GAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGC > 1:615024/1‑124 GAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGC < 2:615024/124‑1 GCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGG > 1:665039/1‑100 GCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGG < 2:665039/100‑1 GCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCCCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGG > 1:743882/1‑100 GCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCCCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGG < 2:743882/100‑1 CCCCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCAACAGGAGAAACCATCACCCCTGCGGCGACAGGGCCCCCAGATGCGCCGCCATGAACATGGCAAATTCTTCAACGGTC > 1:1141627/1‑150 AGGGCGATGATGTGGTCAGCAGCCTGCACTATGCCGATGGCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1408932‑1409082‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccCCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCAACAGGAGAAACCATCACCCCTGCGGCGACAGGGCCCCCAGATGCGCCGCCATGAACATGGCAAATTCTTCAACGGTC < NC_002947/1409146‑1408999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |