| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1421050 | 40 (0.890) | 4 (0.090) | 4/234 | NT | 10.2% | coding (523/891 nt) | PP_1245 | hypothetical protein |
| ? | NC_002947 | = 1421063 | 33 (0.780) | coding (536/891 nt) | PP_1245 | hypothetical protein | |||||
ATGAAGTTGATCAACGAGCCGTATGTGACCATCAGCGACAACCTCAACGTGCGCGCCGCGCCTAACCAGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1420978‑1421050‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggctgCCGACCTTCTCACCAGCCTGGTTAGGCGCGGCGCGCACGTTGAGGTTGTCGCTGATGGTCACATACGGCTCGTTGATCAACTTCATCGACGGCACCGCCTGGATCTTCGGCGCGCGCTTGACCTCGACCTGCTTGGTTTTGGTGTATT < NC_002947/1421063‑1420916 ATGAAGTTGATCAACGAGCCGTATGTGACCATCAGCGACAACCTCACCGTGCGCGCCGCGCCTAACCAGGC < 2:379569/71‑1ATGAAGTTGATCAACGAGCCGTATGTGACCATCAGCGACAACCTCAACGTGCGCGCCGCGCCTAACCAGGC > 1:379569/1‑71 TCAACGAGCCGTATGTGACCATCAGCGACAACCTCAACGTGCGCGCCGCGCCTAACCAGGCTGCCGACCTTCTCACCAGCCTGGTT < 1:1033098/86‑1 TCAACGAGCCGTATGTGACCATCAGCGACAACCTCAACGTGCGCGCCGCGCCTAACCAGGCTGCCGACCTTCTCACCAGCCTGGTT > 2:1033098/1‑86 GACCATCAGCGACAACCTCAACGTGCGCGCCGCGCCTAACCAGGCTGCCGACCTTCTCACCAGCCTGGTTAGGCGCG > 1:900845/1‑77 GACCATCAGCGACAACCTCAACGTGCGCGCCGCGCCTAACCAGGCTGCCGACCTTCTCACCAGCCTGGTTAGGCGCG < 2:900845/77‑1 CAGCCTGCCGACCTTCTCACCAGCCTGGTTAGGCGCGGCGCGCACGTTGAGGTTGTCGCTGATGGTCACATACGGCTCGTTGATCAACTTCATCGACGGCACCGCCTGGATCTTCGGCGCGCGCTTGACCTCGACCTGCTTGGTTTTGGT < 1:87859/150‑1 GCTGCCGACCTTCTCACCAGCCTGGTTAGGCGCGGCGCGCACGTTGAGGTTGTCGCTGATGGTCACATACGGCTCGTTGATCAACTTCATCGACGGCACCGCCTGGATCTTCGGCGCGCGCTTGACCTCGACCTGCTTGGTTTTGGTGTA < 2:247547/150‑1 TGCCGACCTTCTCACCAGCCTGGTGAGGCGCGGCGCGCACGTTGAGGTTGTCGCTGATGGTCACATACGGCTCGTTGATCAACTTCATCGACGGCACCGCCTGGATCTTCGGCGCGCGCTTGACCTCGACCTGCTTGGTTTTGGTGTATT > 1:342165/1‑150 GCCGACCTTCTCACCAGCCTGGTTAGGCGCGGCGCGCACGTTGAGGTTGTCGCTGATGGTCACATACGGCTCGTTGATCAACTTCATCGACGGCACCGCCTGGATCTTCGGCGCGCGCTTGACCTCGACCTGCTTGGTTTTG < 1:601649/142‑1 GCCGACCTTCTCACCAGCCTGGTTAGGCGCGGCGCGCACGTTGAGGTTGTCGCTGATGGTCACATACGGCTCGTTGATCAACTTCATCGACGGCACCGCCTGGATCTTCGGCGCGCGCTTGACCTCGACCTGCTTGGTTTTG > 2:601649/1‑142 ATGAAGTTGATCAACGAGCCGTATGTGACCATCAGCGACAACCTCAACGTGCGCGCCGCGCCTAACCAGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1420978‑1421050‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggctgCCGACCTTCTCACCAGCCTGGTTAGGCGCGGCGCGCACGTTGAGGTTGTCGCTGATGGTCACATACGGCTCGTTGATCAACTTCATCGACGGCACCGCCTGGATCTTCGGCGCGCGCTTGACCTCGACCTGCTTGGTTTTGGTGTATT < NC_002947/1421063‑1420916 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |