New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1580097 =	35 (0.780)	4 (0.090)	4/232	NT	10.7%	coding (1342/3153 nt)	ttgB	efflux pump membrane protein TtgB
	?	NC_002947	1580126 =	34 (0.810)					coding (1313/3153 nt)	ttgB	efflux pump membrane protein TtgB

CCATGGTTCTGGCCATCGGCTTGCTGGTGGACGACGCCATCGTCGTGGTGGAGAACGTCGAGCGGGTCATGTCCGAGGAAGGCTTGCCGCCCAAGGAAGCGACCAAACGCTCGATGGAACAGATCCAGGGCGCCCTGGTGGGTATCGCCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1580249‑1580097 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccctggATCTGTTCCATCGAGCGTTTGGTCGCTTCCTTGGGCGGCAAGCCTTCCTCGGACATGACCCGCTCGACGTTCTCCACCACGACGATGGCGTCGTCCACCAGCAAGCCGATGGCCAGAACCATGGCGAACATGGTCAGGGTGTTGATG  >  NC_002947/1580126‑1580272                                                                                                                                                                                                                                                                                                              CCATGGTTCTGGCCATCGGCTTGCTGGTGGACGACGCCATCGTCGTGGTGGAGGACGTCGAGCGGGTCATGTCCGAGGAAGGCTTGCCGCCCAAGGAAGCGACCAAACGGTCGATGGAACAGATCCAGGGCGCCCTGGTGGGTATCGCCC                                                                                                                                                        <  1:1151514/150‑1                                                                                                                           ATCCAGGGCGCCCTGGTGGGTATCGCCCTGGATCTGTTCCATCGAGCGTTTGGTCGCTTCCTTGGGCGGCAAGCCTTCCTCGGACATGACCCG                                                                                       >  1:568323/1‑93                                                                                                                           ATCCAGGGCGCCCTGGTGGGTATCGCCCTGGATCTGTTCCATCGAGCGTTTGGTCGCTTCCTTGGGCGGCAAGCCTTCCTCGGACATGACCCG                                                                                       <  2:568323/93‑1                                                                                                                               AGGGCGCCCTGGTGGGTATCGCCCTGGATCTGTTCCATCGAGCGTTTGGTCGCTTCCTTGGGCGGCAAGCCTTCCTCGGACATGACCCGCT                                                                                     >  1:72381/1‑91                                                                                                                               AGGGCGCCCTGGTGGGTATCGCCCTGGATCTGTTCCATCGAGCGTTTGGTCGCTTCCTTGGGCGGCAAGCCTTCCTCGGACATGACCCGCT                                                                                     <  2:72381/91‑1                                                                                                                                                  CGCCCTGGATCTGTTCCATCGAGCGTTTGGTCGCTTCCTTGGGCGGCAAGCCTTCCTCGGACATGACCCGCTCGACGTTCTCCACCACGACGATGGCGTCGTCCACCAGCAAGCCGATGGCCAGAACCATGGCGAACATGGTCAGGGTGT       >  1:160534/1‑150                                                                                                                                                     CCTGGATCTGTTCCATCGAGCGTTTGGTCGCTTCCTTGGGCGGCAAGCCTTCCTCGGACATGACCCGCTCGACGTTCTCCACCACGACGATGGCGTCGTCCACCAGCAAGCCGATGGCCAGAACCATGGCGAACATGGTCAGGGTGTTGA    >  1:453927/1‑150                                                                                                                                                      CTGGATCTGTTCCATCGAGCGTTTGGTCGCTTCCTTGGGCGGCAAGCCTTCCTCGGACATGACCCGCTCGACGTTCTCCACCACGACGATGGCGTCGTCCACCAGCAAGCCGATGGCCAGAACCATGGCGAACATGGTCAGGGTGTTGAT   >  1:465272/1‑150                                                                                                                                                      CTGGATCTGTTCCATCGAGCGTTTGGTCGCTTCCTTGGGCGGCAAGCCTTCCTCGGACATGACCCGCTCGACGTTCTCCACCACGACGATGGCGTCGTCCACCAGCAAGCCGATGGCCAGAACCATGGCGAACATGGTCAGGGTGTTGAT   >  2:1000276/1‑150                                                                                                                                                       TGGATCTGTTCCATCGAGCGTTTGGTCGCTTCCTTGGGCGGCAAGCCTTCCTCGGACATGACCCGCTCGACGTTCTCCACCACGACGATGGCGTCGTCCACCAGCAAGCCGATGGCCAGAACCATGGCGAACATGGTCAGGGTGTTGATG  <  1:1000276/150‑1                                                                                                                                                                                                                                                                                                              CCATGGTTCTGGCCATCGGCTTGCTGGTGGACGACGCCATCGTCGTGGTGGAGAACGTCGAGCGGGTCATGTCCGAGGAAGGCTTGCCGCCCAAGGAAGCGACCAAACGCTCGATGGAACAGATCCAGGGCGCCCTGGTGGGTATCGCCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1580249‑1580097 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccctggATCTGTTCCATCGAGCGTTTGGTCGCTTCCTTGGGCGGCAAGCCTTCCTCGGACATGACCCGCTCGACGTTCTCCACCACGACGATGGCGTCGTCCACCAGCAAGCCGATGGCCAGAACCATGGCGAACATGGTCAGGGTGTTGATG  >  NC_002947/1580126‑1580272

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.