| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1666011 = | 36 (0.800) | 3 (0.070) | 3/238 | NT | 8.4% | coding (760/852 nt) | PP_1460 | membrane protein |
| ? | NC_002947 | 1666047 = | 31 (0.720) | coding (724/852 nt) | PP_1460 | membrane protein | |||||
TGCCTGCTGTCGCTGTCGCTGATCTCCGGCTGGCTGTTCCTCGACAACCTGTTCGCCCAGCACCTGGCGCACAAGACCTTGCTGGCCTGTGTCGCCTGGGTGGTGTTCAGCGTGCTGCTGTGGGGCCGCACCCGCCTGGGTTGGCGGGGCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1666164‑1666011‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacaGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAACAGCCAGCCGGAGATCAGCGACAGCGACAGCAGGCACCAGCCGGCCCAGAGGAAGCCGAACAGCA > NC_002947/1666047‑1666193 TGCCTGCTGTCGCTGTCGCTGATCTCCGGCTGGCTGTTCCTCGACAACCTGTTCGCCCAGCACCTGGCGCACAAGACCTTGCTGGCCTGTGTCGCCTGGGTGGTGTTCAGCGTGCTGCTGTGGGGCCGCACCCGCCTGGGTTGGCGGGGC < 1:1163415/150‑1TGCCTGCTGTCGCTGTCGCTGATCTCCGGCTGGCTGTTCCTCGACAACCTGTTCGCCCAGCACCTGGCGCACAAGACCTTGCTGGCCTGTGTCGCCTGGGTGGTGTTCAGCGTGCTGCTGTGGGGCCGCACCCGCCTGGGTTGGCGGGGC > 1:322045/1‑150TGCCTGCTGTCGCTGTCGCTGATCTCCGGCTGGCTGTTCCTCGACAACCTGTTCGCCCAGCACCTGGCGCACAAGACCTTGCTGGCCTGTGTCGCCTGGGTGGTGTTCAGCGTGCTGCTGTGGGGCCGCACCCGCCTGGGTTGGCGGGGC < 2:1087652/150‑1 TGTGGGGCCGCACCCGCCTGGGTTGGCGGGGCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAACAGCCAGCCGGAGATCAGCGACAGCGACAGCA > 2:697078/1‑150 GGGCCGCACCCGCCTGGGTTGGCGGGGCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAACA < 1:1183953/116‑1 GGGCCGCACCCGCCTGGGTTGGCGGGGCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAACA > 2:1183953/1‑116 CCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAACAGCCAGCCGGAGATCAGCGACAGCGACAGCAGGCACCAGCCGGCCCAGAGGAAGCCGAACAG > 2:941314/1‑150 ACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAACAGCCAGCCGGAGATCAGCGACAGCGACAGCAGGCACCAGCCGGCCCAGAGGAAGCCGAACAGCA < 1:1087652/150‑1 ACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAACAGCCAGCCGGAGATCAGCGACAGCGACAGCAGGCACCAGCCGGCCCAGAGGAAGCCGAACAGCA < 1:697078/150‑1 TGCCTGCTGTCGCTGTCGCTGATCTCCGGCTGGCTGTTCCTCGACAACCTGTTCGCCCAGCACCTGGCGCACAAGACCTTGCTGGCCTGTGTCGCCTGGGTGGTGTTCAGCGTGCTGCTGTGGGGCCGCACCCGCCTGGGTTGGCGGGGCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1666164‑1666011‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacaGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAACAGCCAGCCGGAGATCAGCGACAGCGACAGCAGGCACCAGCCGGCCCAGAGGAAGCCGAACAGCA > NC_002947/1666047‑1666193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |