New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1666011 =	36 (0.800)	3 (0.070)	3/238	NT	8.4%	coding (760/852 nt)	PP_1460	membrane protein
	?	NC_002947	1666047 =	31 (0.720)					coding (724/852 nt)	PP_1460	membrane protein

ATGGTCGGCCGTCAGATATGCAAGATGAATTCGCGAACCAGCTTGCTGCCGAAATAGGCCAGCATCAGCAGGCAGAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAACAGCCAGCCGGAGATCAGCGACAGCGACAGCAGGCACCAGCCGGCCCAGAGGAAGCCGAACAGCA  >  NC_002947/1665908‑1666193                                                                                                                                            |                                                                                                                                                   aTGGTCGGCCGTCAGATATGCAAGATGAATTCGCGAACCAGCTTGCTGCCGAAATAGGCCAGCATCAGCAGGCAGAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTg                                                                                                                                          >  2:308750/1‑150 (MQ=255)    gTCGGCCGTCAGATATGCAAGATGAATTCGCGAACCAGCTTGCTGCCGAAATAGGCCAGCATCAGCAGGCAGAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAac                                                                                                                                       <  2:371972/150‑1 (MQ=255)    gTCGGCCGTCAGATATGCAAGATGAATTCGCGAACCAGCTTGCTGCCGAAATAGGCCAGCATCAGCAGGCAGAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAac                                                                                                                                       >  1:1187103/1‑150 (MQ=255)     tCGGCCGTCAGATATGCAAGATGAATTCGCGAACCAGCTTGCTGCCGAAATAGGCCAGCATCAGCAGGCAGAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAaca                                                                                                                                      <  1:1035562/150‑1 (MQ=255)       ggacGTCCGATATGCAAAATGAATTCGCGAACCAGCTTGCTGCCGAAATAGGCCAGCATCAGCAGGCAGAAACCGCTCAGCGTACAGCGAATCCCCATAAGGCGCGTCTGACTCAGGTGGGGGCGTCCCTACAGCAGCACGCTGAAcacc                                                                                                                                    >  2:265165/4‑150 (MQ=255)         ccGTCAGATATGCAAGATGAATTCGCGAACCAGCTTGCTGCCGAAATAGGCCAGCATCAGCAGGCAGAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCGGCACGCTGAAcaccac                                                                                                                                  >  1:1005506/1‑150 (MQ=255)               gATATGCAAGATGAAGTCGCGAACCAGCTTGCTGCCGAAATAGGCCAGCATCAGCAGGCAGAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGc                                                                                                                            <  2:354663/150‑1 (MQ=255)                             aTTCGCGAACCAGCTTGCTGCCGAAATAGGCCAGCATCAGCAGGCAGAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCa                                                                                                              >  2:243822/1‑150 (MQ=255)                              ttCGCGAACCAGCTTGCTGCCGAAATAGGCCAGCATCAGCAGGCAGAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCaa                                                                                                             >  2:322045/1‑150 (MQ=255)                                 gcgAACCAGCTTGCTGCCGAAATAGGCCAGCATCAGCAGGCAGAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGt                                                                                                          >  2:266807/1‑150 (MQ=255)                                   gAACCAGCTTGCTGCCGAAATAGGCCAGCATCAGCAGGCAGAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCt                                                                                                        >  1:369372/1‑150 (MQ=255)                                    aaCCAGCTTGCTGCCGAAATAGGCCAGCATCAGCAGGCAGAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCGGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCtt                                                                                                       <  2:1005506/150‑1 (MQ=255)                                     aCCAGCTTGCTGCCGAAATAGGCCAGCATCAGCAGGCAGAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTtg                                                                                                      <  1:520405/150‑1 (MQ=255)                                       cAGCTTGCTGCCGAAATAGGCCAGCATCAGCAGGCAGAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTtgtg                                                                                                    <  2:888088/150‑1 (MQ=255)                                               tgcCGAAATAGGCCAGCATCAGCAGGCAGAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAg                                                                                                                              >  1:705780/1‑116 (MQ=255)                                               tgcCGAAATAGGCCAGCATCAGCAGGCAGAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAg                                                                                                                              <  2:705780/116‑1 (MQ=255)                                                 ccGAAATAGGCCAGCATCAGCAGGCAGAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGGGACACAGGCCCGCAAGGTCTTGTGGGCGAGATGc                                                                                          >  1:552315/1‑150 (MQ=255)                                                   gAAATAGGCCAGCATCAGCAGGCAGAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTg                                                                                        <  1:308750/150‑1 (MQ=255)                                                                      aggcagAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAgg                                                                     <  1:721174/150‑1 (MQ=255)                                                                         cagAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAAc                                                                  <  1:243822/150‑1 (MQ=255)                                                                          agAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAAca                                                                 >  1:1002658/1‑150 (MQ=255)                                                                              aCCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAAcagc                                                               >  1:813005/1‑148 (MQ=255)                                                                              aCCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAAcagc                                                               <  2:813005/148‑1 (MQ=255)                                                                                         tCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGt                                                                                            >  1:964393/1‑108 (MQ=255)                                                                                         tCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGt                                                                                            <  2:964393/108‑1 (MQ=255)                                                                                                        tgtggggccgcacccgcctgggttggcggggccacaGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAACAGCCAGCCGGAGATCAGCGACAGCGAcagca                                   >  2:697078‑M2/37‑150 (MQ=255)                                                                                                            gggccgcacccgcctgggttggcggggccacaGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAAca                                                                 >  2:1183953‑M2/33‑116 (MQ=255)                                                                                                            gggccgcacccgcctgggttggcggggccacaGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAAca                                                                 <  1:1183953‑M2/84‑1 (MQ=255)                                                                                                            GCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAACAGCCAGCCGGAGATCAGCGACAGCGACAGCAGGCa                               >  1:322045‑M1/1‑150 (MQ=255)                                                                                                            GCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAACAGCCAGCCGGAGATCAGCGACAGCGACAGCAGGCa                               <  1:1163415‑M1/150‑1 (MQ=255)                                                                                                            GCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAACAGCCAGCCGGAGATCAGCGACAGCGACAGCAGGCa                               <  2:1087652‑M1/150‑1 (MQ=255)                                                                                                               ccGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGa                                                                    >  1:768412/1‑110 (MQ=255)                                                                                                               ccGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGa                                                                    <  2:768412/110‑1 (MQ=255)                                                                                                                 gCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCAAGGTGCTGGGCGAACAGGTTGTCGAGGTACAGCCACCCGGAGATCAGCGACAGCGACAGCAGGCACCAGc                          <  2:1187103/150‑1 (MQ=255)                                                                                                                 gCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTACTTCGGGTGCTGGGCGAACAGGTTGTCGAGGAACAGCCAGCCGGAGATCAGCGACAGCGACAGCAGGCACCAGc                          >  2:699956/1‑150 (MQ=255)                                                                                                                   cAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTTAACACCATCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAACAGCCAGCCGGAGATCAGCGACAGCGACAGCAGGCACCAGcct                        >  1:754500/1‑149 (MQ=255)                                                                                                                                gggggCCCCACAGCAGCACGCTGAACACCACCCAGACGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAACAGCCAGCCGGAGATCAGCGACAGCGACAGCAGGCACCAGCCGGCCCAGAGGAAGc           <  2:219392/147‑1 (MQ=255)                                                                                                                                ggCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAACAGCCAGCCGGAGATCAGCGACAGCGACAGCAGGCACCAGCCGGCCCAGAGGAAGc           <  2:576239/149‑1 (MQ=255)                                                                                                                                     ccccACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAACAGCCAGCCGGAGATCAGCGACAGCGACAGCAGGCACCAGCCGGCCCAGAGGAAGCCGAAc      >  1:740779/1‑150 (MQ=255)                                                                                                                                       ccacaGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAACAGCCAGCCGGAGATCAGCGACAGCGACAGCAGGCACCAGCCGGCCCAGAGGAAGCCGAAcag    >  2:941314‑M2/6‑150 (MQ=255)                                                                                                                                         acaGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAACAGCCAGCCGGAGATCAGCGACAGCGACAGCAGGCACCAGCCGGCCCAGAGGAAGCCGAAcagca  <  1:1087652‑M2/147‑1 (MQ=255)                                                                                                                                         acaGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAACAGCCAGCCGGAGATCAGCGACAGCGACAGCAGGCACCAGCCGGCCCAGAGGAAGCCGAAcagca  <  1:697078‑M2/147‑1 (MQ=255)                                                                                                                                            |                                                                                                                                                   ATGGTCGGCCGTCAGATATGCAAGATGAATTCGCGAACCAGCTTGCTGCCGAAATAGGCCAGCATCAGCAGGCAGAAACCGCTCAGCGTCCAGCGGATGGCCATGTGGCCCCGCCAACCCAGGCGGGTGCGGCCCCACAGCAGCACGCTGAACACCACCCAGGCGACACAGGCCAGCAAGGTCTTGTGCGCCAGGTGCTGGGCGAACAGGTTGTCGAGGAACAGCCAGCCGGAGATCAGCGACAGCGACAGCAGGCACCAGCCGGCCCAGAGGAAGCCGAACAGCA  >  NC_002947/1665908‑1666193

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.