New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1936143 =	40 (0.890)	3 (0.070)	3/240	NT	7.4%	coding (402/1149 nt)	PP_1736	hypothetical protein
	?	NC_002947	1936177 =	36 (0.820)					coding (436/1149 nt)	PP_1736	hypothetical protein

GGTCACCGCCACGGCGCGCAGTTGCTCGGCGGCCAAGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1936182‑1936143 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgGTGACCGCCTTTGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGAC  >  NC_002947/1936177‑1936286                                                                                                                                                        GGTCACCGCCACGGCGCGCAGTTGCTCGGCGGCCAAGGCGGTGACCGCCTTTGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGAC  >  2:191685/1‑150      CCGCCACGGCGCGCAGTTGCTCGGCGGCCAAGGCGGTGACCGCCTTTGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCG                     >  1:114270/1‑126      CCGCCACGGCGCGCAGTTGCTCGGCGGCCAAGGCGGTGACCGCCTTTGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCG                     <  2:114270/126‑1                                                                                                                                                        GGTCACCGCCACGGCGCGCAGTTGCTCGGCGGCCAAGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1936182‑1936143 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgGTGACCGCCTTTGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGAC  >  NC_002947/1936177‑1936286

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.