New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1936143 =	40 (0.890)	3 (0.070)	3/240	NT	7.4%	coding (402/1149 nt)	PP_1736	hypothetical protein
	?	NC_002947	1936177 =	36 (0.820)					coding (436/1149 nt)	PP_1736	hypothetical protein

GTTTCGTTGGCCACAGCCTGCTGGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGACCATCGACCACCTGCTGGCCAGTGCGGCGATCCCGCTGCTG  >  NC_002947/1936028‑1936326                                                                                                                                                      |                                                                                                                                                       gTTTCGTTGGCCACAGCCTGCTGGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCgg                                                                                                                                                        >  2:729487/1‑150 (MQ=255)      gtcaacggtgcgggtacgccgatacgccggtggcgcagccaggcctcgatggtgccgcggccctggtagaaggtcaccgcctgaccagactcgtagccaaaggcggtcacCGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGAcc                                                                                                                                                   >  2:191685‑M1/111‑150 (MQ=255)        tGGCCACAGCCTGCTGGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGc                                                                                                                                                 >  1:1046392/1‑150 (MQ=255)               aGCCTGCTGGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGt                                                                                                                                                       <  2:208361/137‑1 (MQ=255)               aGCCTGCTGGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGt                                                                                                                                                       >  1:208361/1‑137 (MQ=255)                gCCTGCTGGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCt                                                                                                                                        <  1:140320/150‑1 (MQ=255)                         ggctgggTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGTCTACGAGTCTg                                                                                                                               <  2:12853/150‑1 (MQ=255)                         cgatacgccggtggcgcagccaggcctcgatggtgccgcggccctggtagaaggtcaccgcctgaccagactcgtagccaaaggcggtcacCGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCgg                                                                                                                                                        >  1:114270‑M1/92‑126 (MQ=255)                         cgatacgccggtggcgcagccaggcctcgatggtgccgcggccctggtagaaggtcaccgcctgaccagactcgtagccaaaggcggtcacCGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCgg                                                                                                                                                        <  2:114270‑M1/35‑1 (MQ=255)                          gctgggTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTgg                                                                                                                              >  1:731438/1‑150 (MQ=255)                            tgggTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCTCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTc                                                                                                                            <  1:859505/150‑1 (MQ=255)                              ggTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAg                                                                                                                          >  1:95415/1‑150 (MQ=255)                                  gCCAGGCCCCCGTGGCGTTGCTCAACAGCAGCCCGTTGCGCAGCCCGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACACCTTGGCCGCCGAGCAACTGCCCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCgg                                                                                                                      >  2:78612/1‑150 (MQ=255)                                   ccAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGt                                                                                                                     >  1:1206780/1‑150 (MQ=255)                                    cAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCtt‑t                                                                                                                                            >  2:186250/1‑126 (MQ=255)                                    cAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCtt‑t                                                                                                                                            <  1:186250/126‑1 (MQ=255)                                                  gTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAggg                                                                                                      <  1:15359/150‑1 (MQ=255)                                                      cTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCcgc                                                                                                  >  1:26585/1‑150 (MQ=255)                                                       tCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCtt‑t                                                                                                                                            >  1:456388/1‑107 (MQ=255)                                                       tCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCtt‑t                                                                                                                                            <  2:456388/107‑1 (MQ=255)                                                       tCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCcgcg                                                                                                 >  1:289340/1‑150 (MQ=255)                                                                      tGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCt                                                                                  <  2:1206780/150‑1 (MQ=255)                                                                                      aaCGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCg                                                                  >  1:120542/1‑150 (MQ=255)                                                                                            ccTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCACCTGCGCGCCGTGGAGGTG‑CCACCTTCTATGGTCGCCTGGGGTCCGACGGTGACCTGCAACCAGGACGGCGGGACCATCGAGGCCTGGCTGCGCCACCGGCGTATCgg                                                            <  2:739906/150‑1 (MQ=255)                                                                                             cTGAACCTGGATGGCATTGGCCACGACTTGTAGACCGACCAACAACGGGCCGCGCCGGTGACCGCCTT‑TGGCTACGTGTCTAGCCAGGCGGGCACCTTCTACCAGGGCCGCGGCAGCATCGAGGCCGGCGTGCTCCACCGGCATATGGGc                                                           >  2:323350/1‑150 (MQ=255)                                                                                             cTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTa                                                                                                            >  1:841996/1‑101 (MQ=255)                                                                                             cTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTa                                                                                                            <  2:841996/101‑1 (MQ=255)                                                                                                 aCCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTAc                                                       <  1:25261/150‑1 (MQ=255)                                                                                                   cTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGCTGAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTAccc                                                     >  1:869924/1‑150 (MQ=255)                                                                                                       gtGGCATCGGCCACGCCTTGGACGCCGAGAAACTGCGCCCCGTGGCGGTGCCCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCAc                                                 <  2:95415/149‑1 (MQ=255)                                                                                                           cATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGtt                                             >  2:687984/1‑150 (MQ=255)                                                                                                             tCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGa                                           >  1:1131378/1‑150 (MQ=255)                                                                                                             tCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGa                                           >  2:641709/1‑150 (MQ=255)                                                                                                              ggtcaccgccacggcgcgcagttgctcggcggccaaggcgGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGAc                                          >  2:191685‑M2/41‑150 (MQ=255)                                                                                                              cGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGAc                                          <  1:687984/150‑1 (MQ=255)                                                                                                                 ccACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGACCAt                                       <  2:262324/150‑1 (MQ=255)                                                                                                                   ccgccacggcgcgcagttgctcggcggccaaggcgGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCg                                                             <  2:114270‑M2/91‑1 (MQ=255)                                                                                                                   ccgccacggcgcgcagttgctcggcggccaaggcgGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCg                                                             >  1:114270‑M2/36‑126 (MQ=255)                                                                                                                              gccgAGCAACTGCGCGCGGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGACCATCGACCACctgctg                          >  1:699832/1‑150 (MQ=255)                                                                                                                                cgAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGACCATCGACCACCTGCTGGc                        >  1:580970/1‑150 (MQ=255)                                                                                                                                 gAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGACCATCGACCACCTGCTGGcc                       >  1:1199617/1‑150 (MQ=255)                                                                                                                                   gCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCCGCACCATCGAGGCCTGGCCGCGCCACCGGGGTATCGGCGAACGCGCACCGTTGACCACGGATCACCTGCTGGcccg                     >  2:368493/1‑148 (MQ=255)                                                                                                                                         gcgcgcCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGACCATCGACCACCTGCTGGCCAGTgcggc               <  2:550/150‑1 (MQ=255)                                                                                                                                         gcgcgcCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGACCATCGACCACCTGCTGGCCAGTgcggc               <  1:729487/150‑1 (MQ=255)                                                                                                                                         gcgcgcCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGACCATCGACCACCTGCTGGCCAGTgcggc               <  2:1046392/150‑1 (MQ=255)                                                                                                                                                      gTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGACCATCGACCACCTGCTGGCCAGTGCGGCGATCCCGctgctg  <  2:26585/150‑1 (MQ=255)                                                                                                                                                      gTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGACCATCGACCACCTGCTGGCCAGTGCGGCGATCCCGctgctg  >  1:602068/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                       GTTTCGTTGGCCACAGCCTGCTGGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGACCATCGACCACCTGCTGGCCAGTGCGGCGATCCCGCTGCTG  >  NC_002947/1936028‑1936326

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.