New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1936143 =	40 (0.890)	3 (0.070)	3/240	NT	7.4%	coding (402/1149 nt)	PP_1736	hypothetical protein
	?	NC_002947	1936177 =	36 (0.820)					coding (436/1149 nt)	PP_1736	hypothetical protein

TGGCCCGGGGTCGTGCGCCAGGCCAGCCGTTTCGTTGGCCACAGCCTGCTGGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGACCAT  >  NC_002947/1936000‑1936289                                                                                                                                                |                                                                                                                                                    tGGCCCGGGGTCGTGCGCCAGGCCAGCCGTTTCGTTGGCCACAGCCTGCTGGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTg                                                                                                                                               >  2:25261/1‑150 (MQ=255)         ggTCGTGCGCCAGGCCAGCCGTTTCGTTGGCCACAGCCTGCTGGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGa                                                                                                                                       <  1:8630/150‑1 (MQ=255)             gTGCGCCAGGCCAGCCGTTTCGTTGGCCACAGCCTGCTGGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCTACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGACCCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCaa                                                                                                                                   <  1:96315/150‑1 (MQ=255)                         agCCGTTTCGTTGGCCACAGCCTGCTGGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTg                                                                                                                       >  2:140320/1‑150 (MQ=255)                          gCCGTTTCGTTGGCCACAGCCTGCTGGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTgg                                                                                                                      <  1:1196395/150‑1 (MQ=255)                             gTTTCGTTGGCCACAGCCTGCTGGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCgg                                                                                                                   >  2:729487/1‑150 (MQ=255)                                  gtcaacggtgcgggtacgccgatacgccggtggcgcagccaggcctcgatggtgccgcggccctggtagaaggtcaccgcctgaccagactcgtagccaaaggcggtcacCGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGAcc                                                                                                              >  2:191685‑M1/111‑150 (MQ=255)                                    tGGCCACAGCCTGCTGGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGc                                                                                                            >  1:1046392/1‑150 (MQ=255)                                        cacaGCCTGCTGGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACtcgtc                                                                                                                             <  2:902511/129‑5 (MQ=255)                                        cacaGCCTGCTGGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTgcgc                                                                                                                             >  1:902511/1‑129 (MQ=255)                                           aGCCTGCTGGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGt                                                                                                                  <  2:208361/137‑1 (MQ=255)                                           aGCCTGCTGGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGt                                                                                                                  >  1:208361/1‑137 (MQ=255)                                            gCCTGCTGGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCt                                                                                                   <  1:140320/150‑1 (MQ=255)                                              ctgctgGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGt                                                                                                                        <  2:970857/128‑1 (MQ=255)                                              ctgctgGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGt                                                                                                                        >  1:970857/1‑128 (MQ=255)                                                     ggctgggTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGTCTACGAGTCTg                                                                                          <  2:12853/150‑1 (MQ=255)                                                     cgatacgccggtggcgcagccaggcctcgatggtgccgcggccctggtagaaggtcaccgcctgaccagactcgtagccaaaggcggtcacCGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCgg                                                                                                                   >  1:114270‑M1/92‑126 (MQ=255)                                                     cgatacgccggtggcgcagccaggcctcgatggtgccgcggccctggtagaaggtcaccgcctgaccagactcgtagccaaaggcggtcacCGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCgg                                                                                                                   <  2:114270‑M1/35‑1 (MQ=255)                                                      gctgggTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTgg                                                                                         >  1:731438/1‑150 (MQ=255)                                                        tgggTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCTCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTc                                                                                       <  1:859505/150‑1 (MQ=255)                                                          ggTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAg                                                                                     >  1:95415/1‑150 (MQ=255)                                                              gCCAGGCCCCCGTGGCGTTGCTCAACAGCAGCCCGTTGCGCAGCCCGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACACCTTGGCCGCCGAGCAACTGCCCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCgg                                                                                 >  2:78612/1‑150 (MQ=255)                                                               ccAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGt                                                                                >  1:1206780/1‑150 (MQ=255)                                                                cAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCtt‑t                                                                                                       >  2:186250/1‑126 (MQ=255)                                                                cAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCtt‑t                                                                                                       <  1:186250/126‑1 (MQ=255)                                                                              gTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAggg                                                                 <  1:15359/150‑1 (MQ=255)                                                                               ttGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCAc                                                                                                                                                     >  2:1162158/1‑66 (MQ=255)                                                                               ttGCTCGACAGCAGCCCGTTGCGCAGCCTGCCGCAAACGCACCTGAACCTGGATGGCATCGGCCAc                                                                                                                                                     <  1:1162158/66‑1 (MQ=255)                                                                                  cTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCcgc                                                             >  1:26585/1‑150 (MQ=255)                                                                                   tCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCtt‑t                                                                                                       >  1:456388/1‑107 (MQ=255)                                                                                   tCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCtt‑t                                                                                                       <  2:456388/107‑1 (MQ=255)                                                                                   tCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCcgcg                                                            >  1:289340/1‑150 (MQ=255)                                                                                                  tGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCt                                             <  2:1206780/150‑1 (MQ=255)                                                                                                                  aaCGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCg                             >  1:120542/1‑150 (MQ=255)                                                                                                                        ccTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCACCTGCGCGCCGTGGAGGTG‑CCACCTTCTATGGTCGCCTGGGGTCCGACGGTGACCTGCAACCAGGACGGCGGGACCATCGAGGCCTGGCTGCGCCACCGGCGTATCgg                       <  2:739906/150‑1 (MQ=255)                                                                                                                         cTGAACCTGGATGGCATTGGCCACGACTTGTAGACCGACCAACAACGGGCCGCGCCGGTGACCGCCTT‑TGGCTACGTGTCTAGCCAGGCGGGCACCTTCTACCAGGGCCGCGGCAGCATCGAGGCCGGCGTGCTCCACCGGCATATGGGc                      >  2:323350/1‑150 (MQ=255)                                                                                                                         cTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTa                                                                       <  2:841996/101‑1 (MQ=255)                                                                                                                         cTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTa                                                                       >  1:841996/1‑101 (MQ=255)                                                                                                                             aCCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTAc                  <  1:25261/150‑1 (MQ=255)                                                                                                                               cTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGCTGAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTAccc                >  1:869924/1‑150 (MQ=255)                                                                                                                                   gtGGCATCGGCCACGCCTTGGACGCCGAGAAACTGCGCCCCGTGGCGGTGCCCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCAc            <  2:95415/149‑1 (MQ=255)                                                                                                                                       cATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGtt        >  2:687984/1‑150 (MQ=255)                                                                                                                                         tCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGa      >  2:641709/1‑150 (MQ=255)                                                                                                                                         tCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGa      >  1:1131378/1‑150 (MQ=255)                                                                                                                                          cGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGAc     <  1:687984/150‑1 (MQ=255)                                                                                                                                             ccACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGACCAt  <  2:262324/150‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                    TGGCCCGGGGTCGTGCGCCAGGCCAGCCGTTTCGTTGGCCACAGCCTGCTGGGGCTGGGTGGCCAGGCCCCCGTGGCGTTGCTCGACAGCAGCCCGTTGCGCAGCCTGCTGCAAACGCACCTGAACCTGGATGGCATCGGCCACGCCTTGGCCGCCGAGCAACTGCGCGCCGTGGCGGTGACCGCCTT‑TGGCTACGAGTCTGGTCAGGCGGTGACCTTCTACCAGGGCCGCGGCACCATCGAGGCCTGGCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGACCAT  >  NC_002947/1936000‑1936289

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.