| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2114144 | 37 (0.820) | 4 (0.090) | 4/234 | NT | 10.8% | coding (185/4899 nt) | PP_1882 | membrane protein |
| ? | NC_002947 | = 2114160 | 31 (0.730) | coding (169/4899 nt) | PP_1882 | membrane protein | |||||
AGTGAAAGTGCGCCAGCCGTTGTTCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2113995‑2114144‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacccgCTCAATATGATTGATTCGGGTTGGGGGCGGGGATGGAATCTGTCACTGACGCAGTTCGCACCGCATACACAGGTCATAACCACGTACAGCGGTGAATCATTCAAAGTGACCGGTAGTTCGGGCTCACGCTTGCAAATGCAGGAACAACG < NC_002947/2114160‑2114012 AGTGAAAGTGCGCCAGCCGTTGTTCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCG > 1:514765/1‑150AGTGAAAGTGCGCCAGCCGTTGTTCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCG > 2:749534/1‑150 TGTTCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGCTCAATATGATTGATTCGGG < 1:299045/150‑1 AGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGCACTGCCTACGTGACAGATTCTTTCCCCGCCCCCAACCCGCTCAATATGATTGATTCGGGTTGGGGGCGGGGATGGAATCTG < 1:749534/150‑1 TTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGCTCAATATGATTGATTCGGGTTGGGGGCGGG > 1:758845/1‑94 TTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGCTCAATATGATTGATTCGGGTTGGGGGCGGG < 2:758845/94‑1 ttcgACCCGCTCAATATGATTGATTCGGGTTGGGGGCGGGGATGGAATCTGTCACTGACGCAGTTCGCACCGCATACACAGGTCATAACCACGTACAGCGGTGAATCATTCAAAGTGACCGGTAGTTCGGGCTCACGCTTGCAAATGCA < 1:173491/145‑1 ttcgACCCGCTCAATATGATTGATTCGGGTTGGGGGCGGGGATGGAATCTGTCACTGACGCAGTTCGCACCGCATACACAGGTCATAACCACGTACAGCGGTGAATCATTCAAAGTGACCGGTAGTTCGGGCTCACGCTTGCAAATGCA > 2:173491/5‑149 GCTCAATATGATTGATTCGGGTTGGGGGCGGGGATGGAATCTGTCACTGACGCAGTTCGCACCGCATACACAGGTCATAACCACGTACAGCGGTGAATCATTCAAAGTGACCGGTAGTTCGGGCTCACGCTTGCAAATGCAG < 1:746429/142‑1 GCTCAATATGATTGATTCGGGTTGGGGGCGGGGATGGAATCTGTCACTGACGCAGTTCGCACCGCATACACAGGTCATAACCACGTACAGCGGTGAATCATTCAAAGTGACCGGTAGTTCGGGCTCACGCTTGCAAATGCAG > 2:746429/1‑142 GCTCAATATGATTGATTCGGGTTGGGGGCGGGGATGGAATCTGTCACTGACGCAGTTCGCACCGCATACACAGGTCATAACCACGTACAGCGCTGGTAGGGAAAGAGTGACCGGTAGTTCGGGCTCACGCTTGCAAATGCAGGAACAACG > 2:31775/1‑150 AGTGAAAGTGCGCCAGCCGTTGTTCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2113995‑2114144‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacccgCTCAATATGATTGATTCGGGTTGGGGGCGGGGATGGAATCTGTCACTGACGCAGTTCGCACCGCATACACAGGTCATAACCACGTACAGCGGTGAATCATTCAAAGTGACCGGTAGTTCGGGCTCACGCTTGCAAATGCAGGAACAACG < NC_002947/2114160‑2114012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |