New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2114144	37 (0.820)	4 (0.090)	4/234	NT	10.8%	coding (185/4899 nt)	PP_1882	membrane protein
	?	NC_002947	= 2114160	31 (0.730)					coding (169/4899 nt)	PP_1882	membrane protein

CGTTGTTCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCATGAAACTCATGAAGTTAAGGGCGTTGGAAT  >  NC_002947/2114012‑2114306                                                                                                                                                     |                                                                                                                                                   cGTTGTTCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTCTTTCCCTACCAGCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGc                                                                                                                                                   >  2:31775‑M2/1‑149 (MQ=255)         cTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGc                                                                                                                                                   <  1:746429‑M2/142‑2 (MQ=255)         cTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGc                                                                                                                                                   >  2:746429‑M2/1‑141 (MQ=255)         cTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGaa                                                                                                                                           <  1:1009073/150‑1 (MQ=255)         cTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGaa                                                                                                                                           >  2:1157770/1‑150 (MQ=255)         cTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGaa                                                                                                                                           >  1:364690/1‑150 (MQ=255)          tGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGcgggtcgaa                                                                                                                                           >  2:173491‑M2/1‑140 (MQ=255)          tGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGcgggtcgaa                                                                                                                                           <  1:173491‑M2/149‑10 (MQ=255)             aTTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTc                                                                                                                                       >  2:311504/1‑150 (MQ=255)                   aaGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGaa                                                                                                                                           <  1:206710/140‑1 (MQ=255)                   aaGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGaa                                                                                                                                           >  2:206710/1‑140 (MQ=255)                   aaGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTg                                                                                                                                 >  2:236880/1‑150 (MQ=255)                    aGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGa                                                                                                                                <  2:364690/150‑1 (MQ=255)                          aGCCCGAACTACCGGTCACTTTGACTATTTCACCTCTTTTCTTTTTTATGACCTGTGTATGCGGTTCCTAACCCGGCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCaa                                                                                                                          <  1:1114162/150‑1 (MQ=255)                          aGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCaa                                                                                                                          <  2:514765/150‑1 (MQ=255)                                  cTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCgggg                                                                                                                  <  1:412351/150‑1 (MQ=255)                                             tttGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTa                                                                                                       >  2:488620/1‑150 (MQ=255)                                                  aTGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGc                                                                                                                              <  1:222440/122‑1 (MQ=255)                                                  aTGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGc                                                                                                                              >  2:222440/1‑122 (MQ=255)                                                   tGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATTCCCGCCCCCAACCCGACTCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGgc                                                                                                 <  2:1130279/150‑1 (MQ=255)                                                           cGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACt                                                                                         >  2:593442/1‑150 (MQ=255)                                                                tACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGa                                                                                    >  1:545674/1‑150 (MQ=255)                                                                   gTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGt                                                                                 <  1:311504/150‑1 (MQ=255)                                                                       ttATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAATTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGa                                                                             <  1:488620/150‑1 (MQ=255)                                                                       ttATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGa                                                                             >  2:163854/1‑150 (MQ=255)                                                                              cTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCACTCATATTGAGCGGGTTGCAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGACGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAg                                                                      <  2:928805/150‑1 (MQ=255)                                                                              cTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAg                                                                      >  1:657597/1‑150 (MQ=255)                                                                                    aTGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTa                                                                >  1:889803/1‑150 (MQ=255)                                                                                         gTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTc                                                           <  1:236880/150‑1 (MQ=255)                                                                                           gCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCg                                                         <  2:545674/150‑1 (MQ=255)                                                                                               aCTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGc                                                     <  2:889803/150‑1 (MQ=255)                                                                                                     tCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTAt                                               <  2:713471/150‑1 (MQ=255)                                                                                                            cAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGcgggttgggggcggggaaagaatctgtcacgtaggcagtgcgcaccgcatacacaggtcataaccacgtacagcggtgaatcattcaaagtgaccggtagttcgggct                                        <  1:749534‑M2/150‑109 (MQ=255)                                                                                                              gATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGc                                                                                                                 >  2:1137092/1‑75 (MQ=255)                                                                                                              gATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGc                                                                                                                 <  1:1137092/75‑1 (MQ=255)                                                                                                                ttCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGctc                                    >  2:1142511/1‑150 (MQ=255)                                                                                                                 tCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGctct                                   >  2:409485/1‑150 (MQ=255)                                                                                                                    aTCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCg                                                    >  2:1144846/1‑130 (MQ=255)                                                                                                                    aTCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCg                                                    <  1:1144846/130‑1 (MQ=255)                                                                                                                       cccGCCCCCAACCCGAATCAATCATATTGAGcgggttgggggcggggatggaatctgtcactgacgcagttcgcaccgcatacacaggtcataa                                                                                     <  2:758845‑M2/94‑64 (MQ=255)                                                                                                                       cccGCCCCCAACCCGAATCAATCATATTGAGcgggttgggggcggggatggaatctgtcactgacgcagttcgcaccgcatacacaggtcataa                                                                                     >  1:758845‑M2/1‑31 (MQ=255)                                                                                                                        ccGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCATGaa                            >  2:985544/1‑150 (MQ=255)                                                                                                                             cccAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCATGAAACTCa                       <  1:163854/150‑1 (MQ=255)                                                                                                                                  cccGAATCAATCATATTGAGcgggttgggggcggggatggaatctgtcactgacgcagttcgcaccgcatacacaggtcataaccacgtacagcggtgaatcattcaaagtgaccggtagttcgggctcacgcttgcaaatgcaggaaca                  <  1:299045‑M2/150‑131 (MQ=255)                                                                                                                                          aatcaTATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCATGAAACTCATGAAGTTAAGGGc          >  2:479922/1‑150 (MQ=255)                                                                                                                                                 ttGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCTAACTCGGGAATTTTGATCGCCCGTGAGTACTGGCCCGTGTGGCTATCGACACCGCTCTCCATGAAACTCATGAAGTTAAGGGCGTTGGaa   >  1:574346/1‑150 (MQ=255)                                                                                                                                                 ttGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGTTGGACAGGGTGTATTTTCGGGTGGGGCTATCGCCCCCGCTC‑CCCTTAAAATCCTTAAGGTTAGGGGGGTGGAAt  >  1:505710/1‑150 (MQ=255)                                                                                                                                                 ttGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCATGAAACTCATGAAGTTAAGGGCGTTGGaa   <  1:1157770/150‑1 (MQ=255)                                                                                                                                                 ttGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGGAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTGCGGTGCGGCTATCGAAACCGCTCTCCATGAAACTCATGAAGTTAAGGGCGTTGGaa   >  1:303157/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CGTTGTTCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCATGAAACTCATGAAGTTAAGGGCGTTGGAAT  >  NC_002947/2114012‑2114306

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.