New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2114144	37 (0.820)	4 (0.090)	4/234	NT	10.8%	coding (185/4899 nt)	PP_1882	membrane protein
	?	NC_002947	= 2114160	31 (0.730)					coding (169/4899 nt)	PP_1882	membrane protein

AGTGAAAGTGCGCCAGCCGTTGTTCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCATGAAACTCATGAAGTTA  >  NC_002947/2113995‑2114293                                                                                                                                                      |                                                                                                                                                      aGTGAAAGTGCGCCAGCCGTTGTTCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCG                                                                                                                                                       >  2:749534‑M1/1‑150 (MQ=255) aGTGAAAGTGCGCCAGCCGTTGTTCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCG                                                                                                                                                       >  1:514765‑M1/1‑150 (MQ=255)  gTGAAAGTGCGCCAGCCGTTGTTCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGa                                                                                                                                                      >  1:691289/1‑150 (MQ=255)  gTGAAAGTGCGCCAGCCGTTGTTCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGa                                                                                                                                                      >  2:149969/1‑150 (MQ=255)       aGTGCGCCAGCCGTTGTGCCAGCCTTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTCAATGATTCACCGCTGTACGTCGTTATGACCTGTGTATGCGGGGCCAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCACCCCGacccaa                                                                                                                                                 <  2:368410/150‑6 (MQ=255)                  cGTTGTTCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTCTTTCCCTACCAGCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGc                                                                                                                                      >  2:31775‑M2/1‑149 (MQ=255)                     tgttCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGctcaatatgattgattcggg                                                                                                                                   <  1:299045‑M1/150‑21 (MQ=255)                          cTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGc                                                                                                                                      >  2:746429‑M2/1‑141 (MQ=255)                          cTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGc                                                                                                                                      <  1:746429‑M2/142‑2 (MQ=255)                          cTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGaa                                                                                                                              >  1:364690/1‑150 (MQ=255)                          cTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGaa                                                                                                                              <  1:1009073/150‑1 (MQ=255)                          cTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGaa                                                                                                                              >  2:1157770/1‑150 (MQ=255)                           tGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGcgggtcgaa                                                                                                                              >  2:173491‑M2/1‑140 (MQ=255)                           tGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGcgggtcgaa                                                                                                                              <  1:173491‑M2/149‑10 (MQ=255)                              aTTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCCACGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGaatcaatc                                                                                                                                               <  1:980462/129‑1 (MQ=255)                              aTTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGaatcaatc                                                                                                                                               >  2:980462/1‑129 (MQ=255)                              aTTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTc                                                                                                                          >  2:311504/1‑150 (MQ=255)                                    aaGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGaa                                                                                                                              >  2:206710/1‑140 (MQ=255)                                    aaGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGaa                                                                                                                              <  1:206710/140‑1 (MQ=255)                                    aaGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTg                                                                                                                    >  2:236880/1‑150 (MQ=255)                                     aGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGa                                                                                                                   <  2:364690/150‑1 (MQ=255)                                           aGCCCGAACTACCGGTCACTTTGACTATTTCACCTCTTTTCTTTTTTATGACCTGTGTATGCGGTTCCTAACCCGGCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCaa                                                                                                             <  1:1114162/150‑1 (MQ=255)                                           aGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGCACTGCCTACGTGACAGATTCTTTCCCCGCCCCCAACCCGctcaatatgattgattcgggttgggggcggggatggaatctg                                                                                                             <  1:749534‑M1/150‑43 (MQ=255)                                           aGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCaa                                                                                                             <  2:514765/150‑1 (MQ=255)                                                   cTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCgggg                                                                                                     <  1:412351/150‑1 (MQ=255)                                                              tttGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTa                                                                                          >  2:488620/1‑150 (MQ=255)                                                                   aTGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGc                                                                                                                 <  1:222440/122‑1 (MQ=255)                                                                   aTGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGc                                                                                                                 >  2:222440/1‑122 (MQ=255)                                                                    tGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATTCCCGCCCCCAACCCGACTCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGgc                                                                                    <  2:1130279/150‑1 (MQ=255)                                                                            cGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACt                                                                            >  2:593442/1‑150 (MQ=255)                                                                                 tACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGa                                                                       >  1:545674/1‑150 (MQ=255)                                                                                    gTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGt                                                                    <  1:311504/150‑1 (MQ=255)                                                                                        ttATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGctcaatatgattgattcgggttgggggcggg                                                                                                                        >  1:758845‑M1/1‑63 (MQ=255)                                                                                        ttATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGctcaatatgattgattcgggttgggggcggg                                                                                                                        <  2:758845‑M1/94‑32 (MQ=255)                                                                                        ttATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAATTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGa                                                                <  1:488620/150‑1 (MQ=255)                                                                                        ttATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGa                                                                >  2:163854/1‑150 (MQ=255)                                                                                               cTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCACTCATATTGAGCGGGTTGCAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGACGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAg                                                         <  2:928805/150‑1 (MQ=255)                                                                                               cTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAg                                                         >  1:657597/1‑150 (MQ=255)                                                                                                     aTGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTa                                                   >  1:889803/1‑150 (MQ=255)                                                                                                          gTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTc                                              <  1:236880/150‑1 (MQ=255)                                                                                                            gCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCg                                            <  2:545674/150‑1 (MQ=255)                                                                                                                aCTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGc                                        <  2:889803/150‑1 (MQ=255)                                                                                                                      tCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTAt                                  <  2:713471/150‑1 (MQ=255)                                                                                                                             cAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGcgggttgggggcggggaaagaatctgtcacgtaggcagtgcgcaccgcatacacaggtcataaccacgtacagcggtgaatcattcaaagtgaccggtagttcgggct                           <  1:749534‑M2/150‑109 (MQ=255)                                                                                                                               gATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGc                                                                                                    >  2:1137092/1‑75 (MQ=255)                                                                                                                               gATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGc                                                                                                    <  1:1137092/75‑1 (MQ=255)                                                                                                                                 ttCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGctc                       >  2:1142511/1‑150 (MQ=255)                                                                                                                                  tCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGctct                      >  2:409485/1‑150 (MQ=255)                                                                                                                                     aTCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCg                                       >  2:1144846/1‑130 (MQ=255)                                                                                                                                     aTCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCg                                       <  1:1144846/130‑1 (MQ=255)                                                                                                                                        cccGCCCCCAACCCGAATCAATCATATTGAGcgggttgggggcggggatggaatctgtcactgacgcagttcgcaccgcatacacaggtcataa                                                                        >  1:758845‑M2/1‑31 (MQ=255)                                                                                                                                        cccGCCCCCAACCCGAATCAATCATATTGAGcgggttgggggcggggatggaatctgtcactgacgcagttcgcaccgcatacacaggtcataa                                                                        <  2:758845‑M2/94‑64 (MQ=255)                                                                                                                                         ccGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCATGaa               >  2:985544/1‑150 (MQ=255)                                                                                                                                              ttcgacccgctcaatatgattgattcgggttgggggcggggatggaatctgtcactgacgcagttcgcaccgcatacacaggtcataaccacgtacagcggtgaatcattcaaagtgaccggtagttcgggctcacgcttgcaaatgca           >  2:173491‑M1/5‑9 (MQ=255)                                                                                                                                              ttcgacccgctcaatatgattgattcgggttgggggcggggatggaatctgtcactgacgcagttcgcaccgcatacacaggtcataaccacgtacagcggtgaatcattcaaagtgaccggtagttcgggctcacgcttgcaaatgca           <  1:173491‑M1/145‑141 (MQ=255)                                                                                                                                              cccAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCATGAAACTCa          <  1:163854/150‑1 (MQ=255)                                                                                                                                                   cccGAATCAATCATATTGAGcgggttgggggcggggatggaatctgtcactgacgcagttcgcaccgcatacacaggtcataaccacgtacagcggtgaatcattcaaagtgaccggtagttcgggctcacgcttgcaaatgcaggaaca     <  1:299045‑M2/150‑131 (MQ=255)                                                                                                                                                      gctcaatatgattgattcgggttgggggcggggatggaatctgtcactgacgcagttcgcaccgcatacacaggtcataaccacgtacagcggtgaatcattcaaagtgaccggtagttcgggctcacgcttgcaaatgcag          >  2:746429‑M1/1‑1 (MQ=255)                                                                                                                                                      gctcaatatgattgattcgggttgggggcggggatggaatctgtcactgacgcagttcgcaccgcatacacaggtcataaccacgtacagcggtgaatcattcaaagtgaccggtagttcgggctcacgcttgcaaatgcag          <  1:746429‑M1/142‑142 (MQ=255)                                                                                                                                                      gctcaatatgattgattcgggttgggggcggggatggaatctgtcactgacgcagttcgcaccgcatacacaggtcataaccacgtacagcgctggtagggaaagagtgaccggtagttcgggctcacgcttgcaaatgcaggaacaacg  >  2:31775‑M1/1‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                      AGTGAAAGTGCGCCAGCCGTTGTTCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGAGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCATGAAACTCATGAAGTTA  >  NC_002947/2113995‑2114293

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.