| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2303174 | 35 (0.780) | 3 (0.070) | 3/224 | NT | 8.9% | intergenic (‑216/+79) | PP_mr30/PP_2027 | C4 ncRNA/hypothetical protein |
| ? | NC_002947 | = 2303208 | 30 (0.740) | intergenic (‑250/+45) | PP_mr30/PP_2027 | C4 ncRNA/hypothetical protein | |||||
CGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2303027‑2303174‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATTACCCTACGCGCGC < NC_002947/2303208‑2303064 CGTGAGGTGTGGCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACTG > 2:322966/1‑150 GGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGC < 1:944156/109‑1 GGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGC > 2:944156/1‑109 GCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCGTGCCCGCgaa < 1:138726/111‑4 GCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCGTGCCCGCgaa > 2:138726/1‑108 GTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGG < 1:759545/144‑1 GTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGG > 2:759545/1‑144 CGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCG < 1:322966/150‑1 CCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATTACCCTACG > 1:57434/1‑150 CGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATTACCCTACGC > 1:42776/1‑150 CCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATTACCCTACGCGCGC < 1:564544/150‑1 CGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2303027‑2303174‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATTACCCTACGCGCGC < NC_002947/2303208‑2303064 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |