New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2303174	35 (0.780)	3 (0.070)	3/224	NT	8.9%	intergenic (‑216/+79)	PP_mr30/PP_2027	C4 ncRNA/hypothetical protein
	?	NC_002947	= 2303208	30 (0.740)					intergenic (‑250/+45)	PP_mr30/PP_2027	C4 ncRNA/hypothetical protein

CGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCGCCCGCCACAAATCCTCCCCCT  >  NC_002947/2303059‑2303356                                                                                                                                                      |                                                                                                                                                     tggCACCTCGCGTAGGGTAATTCCTAAGGGGGGTGATTCTGAAGCATTTGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGATGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCa                                                                                                                                                      <  2:187524/149‑1 (MQ=255)      gcgcgcGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAgtggg                                                                                                                                                 <  1:564544‑M2/150‑6 (MQ=255)          gcgTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAgtgggagcg                                                                                                                                             >  1:42776‑M2/1‑141 (MQ=255)           cgTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAgtgggagcgg                                                                                                                                            >  1:57434‑M2/1‑140 (MQ=255)                         tAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAag                                                                                                                              >  1:439160/1‑150 (MQ=255)                               ggtgaagtCTGAAGCATTGTGTTGCAGTTTCCGAAATCTCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCTACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGCCAGTGGGAGCGGGCATGCCCGCGAAGAGGccc                                                                                                                        <  1:1089532/143‑1 (MQ=255)                                     ttCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAg                                                                                                                  >  2:204856/1‑150 (MQ=255)                                      tCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAATAGGCCCGCACAgg                                                                                                                 <  1:848379/150‑1 (MQ=255)                                          aaGCATTGGGTTGCAGGTTCGGACATCTCTTCCGGTGCTATGTCCAGCGCGGATCCCGGGCACGCCCTCGCCCACAGGTACGGCGCAAGGTTCGCGGCGTACGCCGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAAc                                                                                                             <  2:564544/150‑1 (MQ=25)                                            gCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCa                                                                                                           <  1:341434/150‑1 (MQ=255)                                               ttGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCactt                                                                                                        >  1:414236/1‑150 (MQ=255)                                                  ggTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCacttact                                                                                                     <  1:315572/150‑1 (MQ=255)                                                   gTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCacttactt                                                                                                    >  2:310382/1‑150 (MQ=255)                                                   gTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCacttactt                                                                                                    >  1:263925/1‑150 (MQ=255)                                                    ttGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTg                                                                                                   <  2:414236/150‑1 (MQ=255)                                                     tGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTgg                                                                                                  <  1:204856/150‑1 (MQ=255)                                                          gTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATag                                                                                             >  1:477641/1‑150 (MQ=255)                                                          gTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATag                                                                                             >  1:464319/1‑150 (MQ=255)                                                          gTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATag                                                                                             >  2:835736/1‑150 (MQ=255)                                                           ttCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCACCGAGGTACGGCGCAAGGGTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATaga                                                                                            >  1:750305/1‑150 (MQ=255)                                                                               gtAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCAAGTAGGCTCGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTtc                                                                        <  1:665522/150‑1 (MQ=39)                                                                                         cGGTGTTCGCGGGCACGCCCGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAgtgggagcgggcgtgcccgcgaacaccggcgcagctaccaccgtaagatatttctgaacctgcaacccaatgcttcagaatcaacccg                                                              <  1:322966‑M2/150‑89 (MQ=255)                                                                                                      cACGCCCGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTg                                                 <  2:750305/150‑1 (MQ=255)                                                                                                           ccGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAgtgggagcgggcgtgcccgcgaacaccggcgcagctaccaccgtaagatatttctgaacctgcaacccaatgcttcagaatcaacccgcttaggaattac                                                  >  2:759545‑M2/1‑44 (MQ=255)                                                                                                           ccGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAgtgggagcgggcgtgcccgcgaacaccggcgcagctaccaccgtaagatatttctgaacctgcaacccaatgcttcagaatcaacccgcttaggaattac                                                  <  1:759545‑M2/144‑101 (MQ=255)                                                                                                           ccGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTcgcccgcc                                                               >  1:1117903/1‑131 (MQ=255)                                                                                                           ccGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTcgcccgcc                                                               <  2:1117903/131‑1 (MQ=255)                                                                                                                 ccACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCg                                      >  1:373304/1‑150 (MQ=255)                                                                                                                     aGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAAt                                  <  1:293059/150‑1 (MQ=255)                                                                                                                       gTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAg                                                                                                                  >  1:881468/1‑68 (MQ=255)                                                                                                                       gTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAg                                                                                                                  <  2:881468/68‑1 (MQ=255)                                                                                                                          cGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGCGCGGGCATGAAAGCGAAGAGGCTCGCACATGCAACTACTTACTTGGGATAGATCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTAc                             <  2:439160/150‑1 (MQ=255)                                                                                                                             cgcAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCaa                          >  2:733013/1‑150 (MQ=255)                                                                                                                                        cGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGCCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCCCCCGCcac               >  2:59771/1‑150 (MQ=255)                                                                                                                                          tcGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCGCCCGCCACaa             <  2:933236/149‑1 (MQ=255)                                                                                                                                               cgcgGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGTCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCTGCTGGCGGAGTGGTACCAATCGCCCGACACAAAtcct        <  2:477641/150‑1 (MQ=255)                                                                                                                                                gcgGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCGCCCGCCACAAAtcctc       >  1:758648/1‑150 (MQ=255)                                                                                                                                                  ggTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCGCCCGCCACAAATCCTccc     <  2:464319/150‑1 (MQ=255)                                                                                                                                                    tCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCGCCCGCCACAAATCCTccccc   >  2:48990/1‑150 (MQ=255)                                                                                                                                                     cAgtgggagcgggcgtgcccgcgaacaccggcgcagctaccaccgtaagatatttctgaacctgcaacccaatgcttcagaatcaacccgcttaggaattaccctacgcgcgctgccgaactatcgctgttgtcggggccacacctcacg  >  2:322966‑M2/1‑2 (MQ=255)                                                                                                                                                      |                                                                                                                                                     CGGCAGCGCGCGTAGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTACGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCGCCCGCCACAAATCCTCCCCCT  >  NC_002947/2303059‑2303356

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.