New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2635890 = | 38 (0.840) | 6 (0.140) | 6/242 | NT | 14.4% | coding (727/1047 nt) | PP_2305 | hypothetical protein |
? | NC_002947 | 2635921 = | 34 (0.770) | coding (696/1047 nt) | PP_2305 | hypothetical protein |
GAAATCGTCGCCGAGGGGTTGGCACCGCCAAGCCCGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2635929‑2635890 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcGACGATTTCCTTTTCGATGCGGATCAGCTCTTCCGCCGGTTTGCGTCGGAATGGCAAACGTGAACCCAGCGAGCTCAACAAGGCGTCAAAGCGCATCTTGAACGCCGCCGGGCGCTCGATCACCGGCAACTGGTACTGCTTCTGGTTG > NC_002947/2635921‑2636068 GAAATCGTCGCCGAGGGGTTGGCACCGCCAAGCCCGTGGCGACGATTTCCTTTTCGATGCGGATCAGCTCTTCCGCCGGTTTGCGTCGGAATGGCAAACGTGAACC > 1:418966/1‑106 GAAATCGTCGCCGAGGGGTTGGCACCGCCAAGCCCGTGGCGACGATTTCCTTTTCGATGCGGATCAGCTCTTCCGCCGGTTTGCGTCGGAATGGCAAACGTGAACC < 2:418966/106‑1 CCGAGGGGTTGGCACCGCCAAGCCCGTGGCGACGATTTCCTTTTCGATGCGGATCAGCTCTTCCGCCGGTTTGCGTCGGAATG < 1:411776/83‑1 CCGAGGGGTTGGCACCGCCAAGCCCGTGGCGACGATTTCCTTTTCGATGCGGATCAGCTCTTCCGCCGGTTTGCGTCGGAATG > 2:411776/1‑83 GAGGGGTTGGCACCGCCAAGCCCTCGGCGACGATTTCCTTTTCGATGCGGATCAGCTCTTCCGCCGGTTTGCGTCGGAATGGCAAACGTGAACCCAGCGAGCTCAACAAGG < 1:340822/111‑1 GAGGGGTTGGCACCGCCAAGCCCTCGGCGACGATTTCCTTTTCGATGCGGATCAGCTCTTCCGCCGGTTTGCGTCGGAATGGCAAACGTGAACCCAGCGAGCTCAACAAGG > 2:340822/1‑111 GGCGACGATTTCCTTTTCGATGCGGATCAGCTCTTCCGCCGGTTTGCGTCGGAATGGCAAACGTGAACCCAGCGAGCTCAACAAGGCGTCAAAGCGCATCTTGAACGCCGCCGGGCGCTCGATCACCGGCAACTGGTACTGCTTCTGGTT < 1:966599/150‑1 GGCGACGATTTCCTTTTCGATGCGGATCAGCTCTTCCGCCGGTTTGCGTCGGAATAGAAAAAGGGGACGCAGCGAGCTCAAAAAGGCGTCAAAGCCCCTCTTGAACGCCGCAGGGCGCTCGATCACCGGCAACTGGTACTGCTTCTGGTT < 1:1177610/150‑1 GCGACGATTTCCTTTTCGATGCGGATCAGCTCTTCCGCCGGTTTGCGTCGGAATGGCAAACGTGAACCCAGCGAGCTCAACAAGGCGTCAAAGCGCATCTTGAACGCCGCCGGGCGCTCGATCACCGGCAACTGGTACTGCTTCTGGTTG < 2:966601/150‑1 CGACGATTTCCTTTTCGATGCGGATCAGCTCTTCCGCCGGTTTGCGTCGGAATGGCAAACGTGAACCCAGCGAGCTCAACAAGGCGTCAAAGCGCATCTTGAACGCCGCCGG < 1:424726/112‑1 CGACGATTTCCTTTTCGATGCGGATCAGCTCTTCCGCCGGTTTGCGTCGGAATGGCAAACGTGAACCCAGCGAGCTCAACAAGGCGTCAAAGCGCATCTTGAACGCCGCCGG > 2:424726/1‑112 GAAATCGTCGCCGAGGGGTTGGCACCGCCAAGCCCGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2635929‑2635890 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcGACGATTTCCTTTTCGATGCGGATCAGCTCTTCCGCCGGTTTGCGTCGGAATGGCAAACGTGAACCCAGCGAGCTCAACAAGGCGTCAAAGCGCATCTTGAACGCCGCCGGGCGCTCGATCACCGGCAACTGGTACTGCTTCTGGTTG > NC_002947/2635921‑2636068 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |