| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2773568 | 40 (0.890) | 3 (0.070) | 3/226 | NT | 7.0% | coding (529/1053 nt) | calA | coniferyl alcohol dehydrogenase |
| ? | NC_002947 | = 2773594 | 43 (1.050) | coding (555/1053 nt) | calA | coniferyl alcohol dehydrogenase | |||||
CAACACCATGGGCGGGTACTCCAGCAGCATCGTGGTCAGCGAGCACTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCG‑CCGCTCAAGCACCACGGCGTTGGCCCAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2773414‑2773568‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcccaggccGCCCATGCCGAGGATGCCGATCTTGTGGCCTGGGCCAACGCCGTGGTGCTTGAGCGGCGAATAGGTGGTGATGCCGGCACACAGAATAGGTGCAGCGCTGGGCAGGTCCATGCCGGCCG < NC_002947/2773594‑2773476 CAACACCATGGGCGGGTACTCCAGCAGCATCGTGGTCAGCGAGCACTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCG‑CCGCTCAAGCACCACGGCGTTGGCCC > 1:1082229/1‑150 AACACCATGGGCGGGTACTCCAGCAGCATCGTGGTCAGCGAGCACTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCG‑CCGCTCAAGCACCACGGCGTTGGCCCA < 2:5901/150‑1 AACACCATGGGCGGGTACTCCAGCAGCATCGTGGTCAGCGAGCACTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCG‑CCGCTCAAGCACCACGGCGTTG < 1:597744/145‑1 AACACCATGGGCGGGTACTCCAGCAGCATCGTGGTCAGCGAGCACTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCG‑CCGCTCAAGCACCACGGCGTTG > 2:597744/1‑145 ACCATGGGCGGGTACTCCAGCAGCATCGTGGTCAGCGAGCACTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCG‑CCGCTCAAGCACCACGGCGTTGGCCCAGGC > 2:327755/1‑150 TTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCTCGCATCACCACCTATTCG‑CCGCTCAAGCACCACGGCGTTGGCCCAGGCCGCCCATGCCGAGGATGCCGATCTTGTGGCCTGG < 1:75156/142‑1 TTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCG‑CCGCTCAAGCACCACGGCGTTGGCCCAGGCCGCCCATGCCGAGGATGCCGATCTTGTGGCCTGG > 2:75156/1‑142 TGGTGCGCATACCGGCCGGCATGGCCTTGCCCTGCGCTTCACCTATTCTGTGTGCCGGCTTC‑GCACCACGCCGTCCGCTCAAGCACCACGGCGTTGGCCCAGGCCGCCCATGCCGAGGATGCCGATCTTGTGGCCTGGGCCAACGCCGTG < 1:327755/150‑1 CCGCCCATGCCGAGGATGCCGATCTTGTGGCCTGGGCCAACGCCGTGGTGCTTGAGCGGCGAATAGGTGGTGATGCCGGCACACAGAATAGGTGCAGCGCTGGGCAGGTCCATGCCGGCCG < 1:488064/121‑1 CCGCCCATGCCGAGGATGCCGATCTTGTGGCCTGGGCCAACGCCGTGGTGCTTGAGCGGCGAATAGGTGGTGATGCCGGCACACAGAATAGGTGCAGCGCTGGGCAGGTCCATGCCGGCCG > 2:488064/1‑121 CAACACCATGGGCGGGTACTCCAGCAGCATCGTGGTCAGCGAGCACTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCG‑CCGCTCAAGCACCACGGCGTTGGCCCAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2773414‑2773568‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcccaggccGCCCATGCCGAGGATGCCGATCTTGTGGCCTGGGCCAACGCCGTGGTGCTTGAGCGGCGAATAGGTGGTGATGCCGGCACACAGAATAGGTGCAGCGCTGGGCAGGTCCATGCCGGCCG < NC_002947/2773594‑2773476 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |