| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2808136 = | 48 (1.060) | 3 (0.070) | 3/238 | NT | 5.9% | coding (94/375 nt) | PP_2462 | hypothetical protein |
| ? | NC_002947 | 2808160 = | 49 (1.130) | coding (118/375 nt) | PP_2462 | hypothetical protein | |||||
CGTGCCTGCTCCAGCAATTCGGCGCTGGCCTGCTTGCCCATGGCAAAGTCGGCACCACTGGCTTCGCAGCGGCCATCGTTGCCCGCTGACGCGGCCGGCGCACCACCGCCATCAGCATTGCCACCAGTGCTGCAACCCGCCAGGACAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2808287‑2808136‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcACTGGTGGCAATGCTGATGGCGGTGGTGCGCCGGCCGCGTCAGCGGGCAACGATGGCCGCTGCGAAGCCAGTGGTGCCGACTTTGCCATGGGCAAGCAGGCCAGCGCCGAATTGCTGGAGCAGGCACGCAAGGCCAGCGGCTCGCAG > NC_002947/2808160‑2808306 CGTGCCTGCTCCAGCAATTCGGCGCTGGCCTGCTTGCCCATGGCAAAGTCGGCACCACTGGCTTCGCAGCGGCCATCGTTGCCCGCTGACGCGGCCGGCGCACCACCGCCATCAGCATTGCCACCAGTGCTGCAACCCGCCAGGACAGCA < 1:954388/150‑1CGTGCCTGCTCCAGCAATTCGGCGCTGGCCTGCTTGCCCATGGCAAAGTCGGCACCACTGGCTTCGCAGCGGCCATCGTTGCCCGCTGACGCGGCCGGCGCACCACCGCCATCAGCATTGCCACCAGTGCTGCAACCCGCCAGGACAGCA < 2:657940/150‑1 ATGGCAAAGTCGGCACCACTGGCTTCGCAGCGGCCATCGTTGCCCGCTGACGCGGCCGGCGCACCACCGCCATCAGCATTGCCACCAGTGCTGCAACCCGCCAGGACAGCA < 1:844753/111‑1 ATGGCAAAGTCGGCACCACTGGCTTCGCAGCGGCCATCGTTGCCCGCTGACGCGGCCGGCGCACCACCGCCATCAGCATTGCCACCAGTGCTGCAACCCGCCAGGACAGCA > 2:844753/1‑111 TCAGCATTGCCACCAGTGCTGCAACCCGCCAGGACAGCAGCACTGGTGGCAATGCTGATGGCGGTGGTGCGCCGGCCGCGTCAGCGGGCAACGATGGCCGCTGCGAAGCCAGTGGTGCCGACTTTGCCATGGGCAAGCAGGCCAGCGCCG > 2:118583/1‑150 CTGCAACCCGCCAGGACAGCAGCACTGGTGGCAATGCTGATGGCGGTGGTGCGCCGGCCGCGT < 1:564235/63‑1 CTGCAACCCGCCAGGACAGCAGCACTGGTGGCAATGCTGATGGCGGTGGTGCGCCGGCCGCGT > 2:564235/1‑63 AGCACTGGTGGCAATGCTGATGGCGGTGGTGCGCCGGCCGCGTCAGCAGGCAACGATGGCCGCTGCGAAGCCAGTGGTGCCGACTTTGCCATGGGCAAGCAGGCCAGCGCCGAATTGCTGGAGCAGGCACGCAAGGCCAGCGGCTCGCAG > 1:605100/1‑150 CGTGCCTGCTCCAGCAATTCGGCGCTGGCCTGCTTGCCCATGGCAAAGTCGGCACCACTGGCTTCGCAGCGGCCATCGTTGCCCGCTGACGCGGCCGGCGCACCACCGCCATCAGCATTGCCACCAGTGCTGCAACCCGCCAGGACAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2808287‑2808136‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcACTGGTGGCAATGCTGATGGCGGTGGTGCGCCGGCCGCGTCAGCGGGCAACGATGGCCGCTGCGAAGCCAGTGGTGCCGACTTTGCCATGGGCAAGCAGGCCAGCGCCGAATTGCTGGAGCAGGCACGCAAGGCCAGCGGCTCGCAG > NC_002947/2808160‑2808306 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |