New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3143903	40 (0.890)	3 (0.070)	3/238	NT	7.4%	coding (784/1539 nt)	rbsA‑II	ribose ABC transporter ‑ ATP‑binding subunit
	?	NC_002947	= 3143917	37 (0.850)					coding (798/1539 nt)	rbsA‑II	ribose ABC transporter ‑ ATP‑binding subunit

CGCGTGACGGTACTGCGCAACGGTCGCGATGTCGCTGAAGTCTCCCCGCGCAACACGTCGCTGGAGCAGATCACCCGCCTGATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3143750‑3143903 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgcCCGCCCCAGCCCGCGCACGTCGAGCAACAGCGCACCGGCA  <  NC_002947/3143917‑3143878                                                                                                                                                                                                    CGCGTGACGGTACTGCGCAACGGTCGCGATGTCGCTGAAGTCTCCACCCGCACTGCTGCGCTGGAGCAGATCACCCGCCTGATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGAC                                              <  2:32173/150‑1     TGACGGTACTGCGCAACGGTCGCGATGTCGCTGAAGTCTCCCCGCGCAACACGTCGCTGGAGCAGATCACCCGCCTGATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGAC                                              >  1:747425/1‑146     TGACGGTACTGCGCAACGGTCGCGATGTCGCTGAAGTCTCCCCGCGCAACACGTCGCTGGAGCAGATCACCCGCCTGATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGAC                                              <  2:747425/146‑1                                             CCCGCGCAACGCGTCGCTGGAGCCGATCCCCCGCCCGACGCTCATCCGATAAGGCGGCGATCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCCCGCCCCAGCCCGCGCACGTCGAGCAACAGCGCACCGGCA  <  2:1103163/150‑1                                                                                                    GGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCCCGCCCCAGCCCGCGCACGTCGA                   <  1:1019492/78‑1                                                                                                    GGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCCCGCCCCAGCCCGCGCACGTCGA                   >  2:1019492/1‑78                                                                                                                                                                                                    CGCGTGACGGTACTGCGCAACGGTCGCGATGTCGCTGAAGTCTCCCCGCGCAACACGTCGCTGGAGCAGATCACCCGCCTGATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3143750‑3143903 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgcCCGCCCCAGCCCGCGCACGTCGAGCAACAGCGCACCGGCA  <  NC_002947/3143917‑3143878

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.