New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3143903	40 (0.890)	3 (0.070)	3/238	NT	7.4%	coding (784/1539 nt)	rbsA‑II	ribose ABC transporter ‑ ATP‑binding subunit
	?	NC_002947	= 3143917	37 (0.850)					coding (798/1539 nt)	rbsA‑II	ribose ABC transporter ‑ ATP‑binding subunit

GCGATGTCGCTGAAGTCTCCCCGCGCAACACGTCGCTGGAGCAGATCACCCGCCTGATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCTGGTGGGCTCGGGCGCCAAGGAGTTGCTACGCAGCCTGTTCGGCCTGGCGCCACCGGACAGCGGCGAGGTGCGCCTGGACGGGC  >  NC_002947/3143775‑3144065                                                                                                                                               |                                                                                                                                                     gcgATGTCGCTGAAGTCTCCCCGCGCAACACGTCGCTGGAGCAGATCACCCGCCTGATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACggg                                                                                                                                               <  2:257655/150‑1 (MQ=255)    aTGTCGCTGAAGTCTCCCCGCGCAACACGTCGCTGGAGCAGATCACCCGCCTGATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCt                                                                                                                                            <  1:647140/150‑1 (MQ=255)        cGCTGAAGTCTCCCCGCGCAACACGTCGCTGGAGCAGATCACCCGCCTGATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCa                                                                                                                                        <  1:1166707/150‑1 (MQ=255)        cGCTGAAGTCTCCCCGCGCAACACGTCGCTGGAGCAGATCACCCGCCTGATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCa                                                                                                                                        <  2:1031532/150‑1 (MQ=255)                tctcCCCGCGCAACACGTCGCTGGAGCAGATCACCCGCCTGATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATct                                                                                                                                >  1:925968/1‑149 (MQ=255)                tctcCCCGCGCAACACGTCGCTGGAGCAGATCACCCGCCTGATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCg                                                                                                                                >  2:390405/1‑150 (MQ=255)                      cgcgCAACACGTCGCTGGAGCAGATCACCCGCCTGATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCa                                                                                                                                        <  2:691689/136‑1 (MQ=255)                      cgcgCAACACGTCGCTGGAGCAGATCACCCGCCTGATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCa                                                                                                                                        >  1:691689/1‑136 (MQ=255)                                         gCAGATCACCCGCCTGATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGAt                                                                                                       <  1:795260/150‑1 (MQ=255)                                          cAGATCACCCGCCTGATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGAtc                                                                                                      <  1:390405/150‑1 (MQ=255)                                            gATCACCCGCCTGATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACgg                                                                                                                                                <  2:558185/106‑1 (MQ=255)                                            gATCACCCGCCTGATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACgg                                                                                                                                                >  1:558185/1‑106 (MQ=255)                                              tCACCCGCCTGATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCGGGTGCGCTGTTACTCGCCGTGCGAAGGTCGGGGCAGGCACGGGCCGACCAGGGCATCGACCTGCAGGTGCGCCGAGGCGAGGccgtcg                                                                                                  >  2:258119/1‑150 (MQ=255)                                                   cGCCTGATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTc                                                                                             >  2:1201021/1‑150 (MQ=255)                                                        gATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCACGGTAGCGGTGCCCGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCgg                                                                                        <  1:265242/150‑1 (MQ=255)                                                         aTGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCggg                                                                                       >  2:16208/1‑150 (MQ=255)                                                              cAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTCCCAGGGCATCGACCTGCAGGTGCGCCGGGGCGAGATCGTCGGCCTCACCGGGCtggt                                                                                  >  1:988477/1‑150 (MQ=255)                                                               aaCCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGAGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCtggtg                                                                                 >  1:349817/1‑150 (MQ=255)                                                                aCCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCtggtgg                                                                                >  1:1081341/1‑150 (MQ=255)                                                                aCCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGGGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCtggtgg                                                                                <  2:159232/150‑1 (MQ=255)                                                                  cgcgAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCTGGTGGGc                                                                              <  1:29142/150‑1 (MQ=255)                                                                          cGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCTGGTGGGCTCGGgcgc                                                                      <  2:507270/150‑1 (MQ=255)                                                                             cGAGCTGTACCCCAAGGTAGCGGTACCTGCCGGTGCGCTGTTGCTCGGCGTGCGCGGGCTGGGCCGGGCACGGGCCTACCGGGGCATGTAGGTGAAGCTGCGCCGTCGCGGGATCGTCCGCCTCACCCGGCTGATGAGCTCGGACGCCaa                                                                   >  2:73848/1‑150 (MQ=255)                                                                                  tGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCTGGTGGGCTCGGGCGCCAAGGAgg                                                              >  2:1124500/1‑149 (MQ=255)                                                                                  tGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCCACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCTGGTGGGCTCGGGCGCCAAGGAGt                                                              <  1:258119/150‑1 (MQ=255)                                                                                       cccAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGGCTCAcc                                                                                          >  1:46459/1‑117 (MQ=255)                                                                                       cccAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCTGGTGGGCTCGGGCGCCAAGGAGTTGCTa                                                         >  2:961065/1‑150 (MQ=255)                                                                                       cccAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGAAGGTGCGCCGTGGCGAGATCGTCGGGCTCAcc                                                                                          <  2:46459/117‑1 (MQ=255)                                                                                        ccAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTg                                                                                                              <  2:908105/96‑1 (MQ=255)                                                                                        ccAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTg                                                                                                              >  1:908105/1‑96 (MQ=255)                                                                                             gTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGCGACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCTGGTGGGCTCGGGCGCCAAGGAGTTGCTACGCAGc                                                   <  1:73848/150‑1 (MQ=255)                                                                                                  ggTGCCTGCCGGTGCGCTGTTGCTCGACGGGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCTGGTGGGCTCGGGCGCCAAGGAGTTGCTACGCAGCCTGtt                                              <  2:247529/150‑1 (MQ=255)                                                                                                      cctgccGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCTGGTGGGCTCGGGCGCCAAGGAGTTGCTACGCAGCCTGTTCGGc                                          >  1:196817/1‑150 (MQ=255)                                                                                                        tgccGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGgcacgtcgagcaacagcgcaccggcaggcaccgctaccttggggtacagatcgccgccttatcggatgagcgtcgggcgggggatcggctccagcgacgcgttgcgcggg                                        <  2:1103163‑M2/150‑111 (MQ=255)                                                                                                        tgccGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCTGGTGGGCTCGGGCGCCAAGGAGTTGCTACGCAGCCTGTTCGGCCt                                        <  2:1177872/150‑1 (MQ=255)                                                                                                                        cTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCTGGTGGGCTCGGGCGCCAAGGAGTTGCTACGCAGc                                                   >  1:778452/1‑123 (MQ=255)                                                                                                                        cTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCTGGTGGGCTCGGGCGCCAAGGAGTTGCTACGCAGc                                                   <  2:778452/123‑1 (MQ=255)                                                                                                                         tCGACGTGCGCGGGCTGGGGCGGgcacgtcgagcaacagcgcaccggcaggcaccgctaccttggggtacagctcgcc                                                                                               >  2:1019492‑M2/1‑23 (MQ=255)                                                                                                                         tCGACGTGCGCGGGCTGGGGCGGgcacgtcgagcaacagcgcaccggcaggcaccgctaccttggggtacagctcgcc                                                                                               <  1:1019492‑M2/78‑56 (MQ=255)                                                                                                                           gACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCTGGTGGGCTCGGGCGCCAAGGAGTTGCTACGCAGCCTGTTCGGCCTGGCGCCACCGGACAgcggc                     <  1:1143999/150‑1 (MQ=255)                                                                                                                              gTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCTGGTGGGCTCGGGCGCCAAGGAGTTGCTACGCAGCCTGTTCGGCCTGGCGCCACCGGACAGCGGCGAg                  <  2:1085071/150‑1 (MQ=255)                                                                                                                               tGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCTACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCTGGTGGGCTCGGGCGCCAAGGAGTTGCTACGCAGCCTGTTCGGCCTGGCGCCACCGGACAGCGGCGAgg                 <  2:925968/150‑1 (MQ=255)                                                                                                                                 cgcgGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGTCGAGATCGTCGGCCTCACCGGGCTGGTGGGCTCGGGCGCCAAGGAGTTGCTACGCAGCCTGTTCGGCCTGGCGCCACCGGACAgcggc                     <  2:217454/144‑1 (MQ=255)                                                                                                                                 cgcgGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGTCGAGATCGTCGGCCTCACCGGGCTGGTGGGCTCGGGCGCCAAGGAGTTGCTACGCAGCCTGTTCGGCCTGGCGCCACCGGACAgcggc                     >  1:217454/1‑144 (MQ=255)                                                                                                                                            gcgggcACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCTGGTGGGCTCGGGCGCCAAGGAGTTGCTTCGCAGCCTGTTCGGCCTGGCGCCACCGGACAGCGGCGAGGTGCGCCTGGACgg    <  2:349817/150‑1 (MQ=255)                                                                                                                                             cgggcACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCTGGTGGGCTCGGGCGCCAAGGAGTTGCTACGCAGCCTGTTCGGCCTGGCGCCACCGGACAGCGGCGAGGTGCGCCTGGACggg   <  2:196817/150‑1 (MQ=255)                                                                                                                                              gggcACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCTGGTGGGCTCGGGCGCCAAGGAGTTGCTACGCAGCCTGTTCGGCCTGGCGCCACCGGACAGCGGCGAGGTGCGCCTGGACGGGc  <  2:1081341/150‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                     GCGATGTCGCTGAAGTCTCCCCGCGCAACACGTCGCTGGAGCAGATCACCCGCCTGATGGTCAACCGCGAAGTCGGCGAGCTGTACCCCAAGGTAGCGGTGCCTGCCGGTGCGCTGTTGCTCGACGTGCGCGGGCTGGGGCGGGCACGGGCCTACCAGGGCATCGACCTGCAGGTGCGCCGTGGCGAGATCGTCGGCCTCACCGGGCTGGTGGGCTCGGGCGCCAAGGAGTTGCTACGCAGCCTGTTCGGCCTGGCGCCACCGGACAGCGGCGAGGTGCGCCTGGACGGGC  >  NC_002947/3143775‑3144065

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.