| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3332998 | 42 (0.930) | 3 (0.070) | 3/234 | NT | 6.8% | coding (150/918 nt) | PP_2930 | L‑serine dehydratase |
| ? | NC_002947 | = 3333016 | 42 (0.990) | coding (132/918 nt) | PP_2930 | L‑serine dehydratase | |||||
CCTTGGCGTCTTCCAGGTGCAGCAACTGCTTGGCCCGTTCGGTGGTGGTTTCGGGTATCACCACGGTCACCGGCACCCCCAGCTTGCGTCCGGCATAGGCGACTGCCAAACCGGCATTGCCACCTGACGAGGACACAAAGTGCCGGGCGCCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3332844‑3332998‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacgcCTGCGAGGTACACCACGC‑‑GCGTGGCGCCCGGCACTTTGTGTCCTCGTCAGGTGGCAATGCCGGTTTGGCAGTCGCCTATGCCGGACGCAAGCTGGGGGTGCCGGTGACCGTGGTGATACCCGAAACCACCACCGAACGGGCCAA < NC_002947/3333016‑3332873 CCTTGGCGTCTTCCAGGTGCAGCAACTGCTTGGCCCGTTCGGTGGTGGTTTCGGGTATCACCACGGTCACCGGCACCCCCAGCTTGCGTCCGGCATAGGCGACTGCCAAACCGGCATTGCCACCTGACGAGGACACAAAGTGCCGGGCGC < 1:463005/150‑1CCTTGGCGTCTTCCAGGTGCAGCAACTGCTTGGCCCGTTCGGTGGTGGTTTCGGGTATCACCACGGTCACCGGCACCCCCAGCTTGCGTCCGGCATAGGCGACTGCCAAACCGGCATTGCCACCTGACGAGGACACAAAGTGCCGGGCGC > 2:124477/1‑150 GGCGTCTTCCAGGTGCAGCAACTGCTTGGCCCGTTCGGTGGTGGTTTCGGGTATCACCACGGTCACCGGCACCCCCAGCTTGCGTCCGGCATAGGCGACTGCCAAACCGGCATTGCCACCTAACGCGGAGACAAAGTGCCGGGCGCCACG > 1:428215/1‑150 ACCTGACGAGGACACAAAGTGCCGGGCGCCACGCCTGCGAGGTACACCACGC‑‑GCGTGGCGCCCGGCACTTT < 1:155158/71‑1 ACCTGACGAGGACACAAAGTGCCGGGCGCCACGCCTGCGAGGTACACCACGC‑‑GCGTGGCGCCCGGCACTTT > 2:155158/1‑71 ACAAAGTGCCGGGCGCCACGC‑‑GCGTGGTGTACCTCGCAGGCGTGGCGCCCGGCACTTTGTGTCCTCGTCAGGTGGCAATGCCGGTTTGGCAGTCGCCTATGCCGGACGCAAGCTGGGGGTGCCGGTGACCGTGGTGATACCCGAAACCAC > 2:1181747/1‑150 CCACGCCTGCGAGGTACACCACGC‑‑GCGTGGCGCCCGGCACTTTGTGTCCTCGTCAGGTGGCAATGCCGGTTTGGCAGTCGCCTATGCCGGACGCAAGCTGGGGGTGCCGGTGACCGTGGTGATACCCGAAACCACCACCGAACGGGCCAA < 2:1076584/150‑1 CCTTGGCGTCTTCCAGGTGCAGCAACTGCTTGGCCCGTTCGGTGGTGGTTTCGGGTATCACCACGGTCACCGGCACCCCCAGCTTGCGTCCGGCATAGGCGACTGCCAAACCGGCATTGCCACCTGACGAGGACACAAAGTGCCGGGCGCCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3332844‑3332998‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacgcCTGCGAGGTACACCACGC‑‑GCGTGGCGCCCGGCACTTTGTGTCCTCGTCAGGTGGCAATGCCGGTTTGGCAGTCGCCTATGCCGGACGCAAGCTGGGGGTGCCGGTGACCGTGGTGATACCCGAAACCACCACCGAACGGGCCAA < NC_002947/3333016‑3332873 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |