New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3455021 =	43 (0.950)	6 (0.140)	6/236	NT	13.8%	coding (913/1953 nt)	aacs	acetoacetyl‑CoA synthetase
	?	NC_002947	3455047 =	34 (0.790)					coding (887/1953 nt)	aacs	acetoacetyl‑CoA synthetase

TCAAGGAACACGGCCTGCACAACGACCTGAAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3455056‑3455021 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccgTGTTCCTTGAGGTGTTGCAACAGCACGCCTCCGGCGCGATGGACAATGCACTTGGGCACGCCGGTGGTGCCACTGGAATAGAGGATGTACAGCGGGTGGTCGAACGGCAGCGGGGTGAAACGGGGCTCGCCGCCGGGCTGGAAGAA  >  NC_002947/3455047‑3455192                                                                                                                                                                                        TCAAGGAACACGGCCTGCACAACGACCTGAAGGCCGTGTTCCTTGAGGTGTTGCAACAGCACGCCTCCGGCGCGATGGACAATGCACTTGGGCACGCCGGTGGTGCCACTGGAATAGAGGATGTACAGCGGGTGGTCGAACGGCAGCGGG                                  >  1:219147/1‑150     GGAACACGGCCTGCACAACGACCTGAAGGCCGTGTTCCTTGAGGTGTTGCAACAGCACGCCTCCGGCGCGATGGACAATGCACTTGGGCACGCCGGTGGTGCCACTGGAATAGAGGATGTACAGCG                                                      <  1:372251/126‑1     GGAACACGGCCTGCACAACGACCTGAAGGCCGTGTTCCTTGAGGTGTTGCAACAGCACGCCTCCGGCGCGATGGACAATGCACTTGGGCACGCCGGTGGTGCCACTGGAATAGAGGATGTACAGCG                                                      >  2:372251/1‑126          ACGGCCTGCACAACGACCTGAAGGCCGTGTTCCTTGAGGTGTTGCAACAGCACGCCTCCGGCGCGATGGACAATGCACTTGGGCACGCCGGTGGTGCCACTGGAATAGAGGATGTACAGCGGGTGGTCGAACGGCAGCGGGGTGAAACGG                         >  1:187716/1‑150          ACGGCCTGCACAACGACCTGAAGGCCGTGTTCCTTGAGGTGTTGCAACAGCACGCCTCCGGCGCGATGGACAATGCACTTGGGCACGCCGGTGGTGCCACTGGAATAGAGGATGTACAGCGGGTGGTCGAACGGCAGCGGGGTGAAACGG                         <  2:219147/150‑1                       CGACCTGAAGGCCGTGTTCCTTGAGGTGTTGCAACAGCACGCCTCCGGCGCGATGGACAATGCACTTGGGCACGCCGGTGGTGCCACTGGAATAGAGGATGTACAGCGGGTGGTCGAACGGCAGCGGGGTGAAACGGGGCTCGCCGCCGG            <  2:187716/150‑1                                 GCCGTGTTCCTTGAGGTGTTGCAACAGCACGCCTCCGGCGCGATGGACAATGCACTTGGGCACGCCGGTGGTGCCACTGGAATAGAGGATGTACAGCGGGTGGTCGAACGGCAGCGGGGTGAAACGGGGCTCGCCGCCGGGCTGGAAGAA  >  2:447944/1‑150                                   CGTGTTCCTTGAGGTGTTGCAACAGCACGCCTCCGGCGCGATGGACAATGCACTTGGGCACGCCGGTGGTGCCACTGGAATAGA                                                                  <  1:416464/84‑1                                   CGTGTTCCTTGAGGTGTTGCAACAGCACGCCTCCGGCGCGATGGACAATGCACTTGGGCACGCCGGTGGTGCCACTGGAATAGA                                                                  >  2:416464/1‑84                                                                                                                                                                                        TCAAGGAACACGGCCTGCACAACGACCTGAAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3455056‑3455021 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccgTGTTCCTTGAGGTGTTGCAACAGCACGCCTCCGGCGCGATGGACAATGCACTTGGGCACGCCGGTGGTGCCACTGGAATAGAGGATGTACAGCGGGTGGTCGAACGGCAGCGGGGTGAAACGGGGCTCGCCGCCGGGCTGGAAGAA  >  NC_002947/3455047‑3455192

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.