| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3546886 | 37 (0.820) | 4 (0.090) | 4/240 | NT | 10.6% | coding (118/1527 nt) | PP_3131 | membrane protein |
| ? | NC_002947 | = 3546913 | 32 (0.730) | coding (91/1527 nt) | PP_3131 | membrane protein | |||||
CAGGACGACCGCGCCCACCCCCAGGTACAGCCAGAAGCTGTGGGAGAAAAAAGCCAGCAGGGTCAGCAGGAACCACAGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3546806‑3546886‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gattCCGCTCAGCGACTACAAGCGCCGGCGCAATCTGTGGTTCCTGCTGACCCTGCTGGCTTTTTTCTCCCACAGCTTCTGGCTGTACCTGGGGGTGGGCGCGGTCGTCCTGTTGCTGGCCGGGCGCCGCGAGCACAACCCCATGGCGCTGTT < NC_002947/3546913‑3546765 CAGGACGACCGCGCCCACCCCCAGGTACAGCCAGAAGCTGTGGGAGAAAAAAGCCAGCAGGGTCAGCAGGAACCACAGATTCCGCTCAGCGACTACAAGCGCCGGCGCAATC < 1:367474/112‑1CAGGACGACCGCGCCCACCCCCAGGTACAGCCAGAAGCTGTGGGAGAAAAAAGCCAGCAGGGTCAGCAGGAACCACAGATTCCGCTCAGCGACTACAAGCGCCGGCGCAATC > 2:367474/1‑112 GAAGCTGTGGGAGAAAAAAGCCAGCAGGGTCAGCAGGAACCACAGATTCCGCTCAGCGACTACAAGCGCCGGCGCAATCTGTG > 1:444128/1‑83 GAAGCTGTGGGAGAAAAAAGCCAGCAGGGTCAGCAGGAACCACAGATTCCGCTCAGCGACTACAAGCGCCGGCGCAATCTGTG < 2:444128/83‑1 GATTCCGCTCAGCGACTACAAGCGCCGGCGCAATCTGTGGTTCCTGCTGACCCTGCTGGCTTTTTTCTCCCACAGCTTCTGGCTGTACCTGGGGGTGGGCGCGGTCGTCCTGTTGCTGGCCGGGCGCCGCGAGCACAACCCCATGGCGCT > 1:933534/1‑150 GATTCCGCTCAGCGACTACAAGCGCCGGCGCAATCTGTGGTTCCTGCTGACCCTGCTGGCTTTTTTCTCCCACAGCTTCTGGCTGTACCTGGGGGTGGGCGCGGTCGTCCTGTTGCTGGCCGGGCGCCGCGAGCACAACCCCATGGCGCT < 2:157571/150‑1 TCCGCTCAGCGACTACAAGCGCCGGCGCAATCTGTGGTTCCTGCTGACCCTGCTGGCTTTTTTCTCCCACAGCTTCTGGCTGTACCTGGGGGTGGGCGCGGTCGTCCTGTTGCTGGCCGGGCGCCGCGAGCACAACCCCATGGCGCTGTT < 2:661439/150‑1 TCCGCTCAGCGACTACAAGCGCCGGCGCAATCTGTGGTTCCTGCTGACCCTGCTGGCTTTTTTCTCCCACAGCTTCTGGCCGTACCTGGGGGTGGGCGCGGTCGTCCTGTTGCTGGCCGGGCGCCGCGAGCACAACCCCATGGCGCTGTT > 2:228026/1‑150 CAGGACGACCGCGCCCACCCCCAGGTACAGCCAGAAGCTGTGGGAGAAAAAAGCCAGCAGGGTCAGCAGGAACCACAGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3546806‑3546886‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gattCCGCTCAGCGACTACAAGCGCCGGCGCAATCTGTGGTTCCTGCTGACCCTGCTGGCTTTTTTCTCCCACAGCTTCTGGCTGTACCTGGGGGTGGGCGCGGTCGTCCTGTTGCTGGCCGGGCGCCGCGAGCACAACCCCATGGCGCTGTT < NC_002947/3546913‑3546765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |