New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3958449 = | 52 (1.150) | 3 (0.070) | 3/236 | NT | 6.0% | coding (1980/5844 nt) | mnxG | manganese‑oxidizing multicopper oxidase |
? | NC_002947 | 3958492 = | 44 (1.020) | coding (1937/5844 nt) | mnxG | manganese‑oxidizing multicopper oxidase |
CGGCAAGGCCATGGCGCCCATGCCCGGCAAAGTCGTGGTCGTGCCCAAGCTTTCCGAAGCATTGGTTGCCGCCAACGATGATGACCACGAAGACGAGGATGATGACGACCACGCCAGTGAGGCGCCCGTGCGCAAGGCCGTGGGCTCGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3958602‑3958449 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcgTGGTCGTCATCATCCTCGTCTTCGTGGTCATCATCGTTGGCGGCAACCAATGCTTCGGAAAGCTTGGGCACGACCACGACTTTGCCGGGCATGGGCGCCATGGCCTTGCCGGGCAACGGCACGATGGCCGGAATCGGCGTACCGGCA > NC_002947/3958492‑3958638 CGGCAAGGCCATGGCGCCCATGCCCGGCAAAGTCGTGGTCGTGCCCAAGCTTTCCGAAGCATTGGTTGCCGCCAACGATGATGACCACGAAGACGAGGATGATGACGACCACGCCAGTGAGGCGCCCGTGCGCAAGGCCGTGGGCTCGCT < 1:162385/150‑1 GACCACGCCAGTGAGGCGCCCGTGCGCAAGGCCGTGGGCTCGCTGGCGTGGTCATCATCATCCTCGTCTTCGTGGTCATCATCGTTGGCGGCAACCAATGCTTCGGAAAGCTTGGGCACGACCACGACTTTGC < 1:660869/133‑1 GACCACGCCAGTGAGGCGCCCGTGCGCAAGGCCGTGGGCTCGCTGGCGTGGTCATCATCATCCTCGTCTTCGTGGTCATCATCGTTGGCGGCAACCAATGCTTCGGAAAGCTTGGGCACGACCACGACTTTGC > 2:660869/1‑133 CAGTGAGGCGCCCGTGCGCAAGGCCGTGGGCTCGCTGGCGTGGTCGTCATCATCCTCGTCTTCGTGGTCATCATCGTTGGCGGCAACCAATGCTTCGGAAAGCTTGGGCACGACCACGACTTTGCCGGGCATGGGCGCCATGGCCTTGCC > 1:543363/1‑150 CTGGCGTGGTCGTCATCATCCTCGTCTTCGTGGTCATCATCGTTGGCGGCAACCAATGCTTCGGAAAGCTTGGGCACGACCACGACTTTGCCGGGCATGGGCGCCATGGCCTTGCCGGGCAACGGCACGATGGCCGGAATCGGCGTACCG < 2:365172/150‑1 TGGCGTGGTCGTCATCATCCTCGTCTTCGTGGTCATCATCGCTGGCGGCAACCAATGCTTCGGAAAGCTTGGGCACGACCACGACTTTGCCGGGCATGGGCGCCATGGCCTTGCCGGGCAACGGCACGATGGCCGGAATCGGCGTACCGG < 2:823773/150‑1 GCGTGGTCGTCATCATCCTCGTCTTCGTGGTCATCATCGTTGGCGGCAACCAATGCTTCGGAAAGCTTGGGCACGACCACGACTTTGCCGGGCATGGGCGCCATGGCCTTGCCGGGCAACGGCACGATGGCCGGAATCGGCGTACCGGCA > 2:1114072/1‑150 CGGCAAGGCCATGGCGCCCATGCCCGGCAAAGTCGTGGTCGTGCCCAAGCTTTCCGAAGCATTGGTTGCCGCCAACGATGATGACCACGAAGACGAGGATGATGACGACCACGCCAGTGAGGCGCCCGTGCGCAAGGCCGTGGGCTCGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3958602‑3958449 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcgTGGTCGTCATCATCCTCGTCTTCGTGGTCATCATCGTTGGCGGCAACCAATGCTTCGGAAAGCTTGGGCACGACCACGACTTTGCCGGGCATGGGCGCCATGGCCTTGCCGGGCAACGGCACGATGGCCGGAATCGGCGTACCGGCA > NC_002947/3958492‑3958638 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |