| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4064806 = | 51 (1.130) | 4 (0.090) | 4/240 | NT | 8.0% | coding (1198/1491 nt) | PP_3582 | RND transporter outer membrane protein |
| ? | NC_002947 | 4064841 = | 43 (0.980) | coding (1163/1491 nt) | PP_3582 | RND transporter outer membrane protein | |||||
GACCAGACGGTGGCGCAGTACCGCCAGACCGTGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4064842‑4064806‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggTCATACACGGCCACCGTGCGGTCGACCTCGGCGCTGCGTTTGCCGGCGTCGAACAGGGTCAGCGCCAGCTGCGGG > NC_002947/4064841‑4064915 GACCAGACGGTGGCGCAGTACCGCCAGACCGTGCTGGTCATACATGGCCACCGTGCGGTCGACCTCGGCGCTGCGTTTGCCGGCGTCGAACAGGGT < 1:898291/96‑1GACCAGACGGTGGCGCAGTACCGCCAGACCGTGCTGGTCATACATGGCCACCGTGCGGTCGACCTCGGCGCTGCGTTTGCCGGCGTCGAACAGGGT > 2:898291/1‑96 GACGGTGGCGCAGTACCGCCAGACCGTGCTGGTCATACACGGCCACCGTGCGGTCGACCTCGGCGCTGCGTTTGCCGGCGTCGAACAGGGTCAGCGCCAGCTGCGGG > 1:133805/1‑107 GACGGTGGCGCAGTACCGCCAGACCGTGCTGGTCATACACGGCCACCGTGCGGTCGACCTCGGCGCTGCGTTTGCCGGCGTCGAACAGGGTCAGCGCCAGCTGCGGG < 2:133805/107‑1 GACCAGACGGTGGCGCAGTACCGCCAGACCGTGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4064842‑4064806‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggTCATACACGGCCACCGTGCGGTCGACCTCGGCGCTGCGTTTGCCGGCGTCGAACAGGGTCAGCGCCAGCTGCGGG > NC_002947/4064841‑4064915 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |