New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 407948129 (0.640)5 (0.140) 5/200 NT 15.5% intergenic (‑241/+143) sdaC/amaC serine:H+ symport permease/D‑lysine aminotransferase
?NC_002947 = 4079550 31 (0.850)intergenic (‑310/+74) sdaC/amaC serine:H+ symport permease/D‑lysine aminotransferase

AACCGGAAAAGAGGGGCGCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4079310‑4079481
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcggccttgcgtcgcgaAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAGGCCGCCCCACAGGCGCCCAGGCCGCTACATTCCACCGATCGACACCAGCAATGC  <  NC_002947/4079550‑4079403
                                                                                                                                                                                                                                                                                                                                
AACCGGAAAAGAGGGGCGCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGAGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTG                                                                                                                                                                            >  1:696307/1‑150
  CCGGAAAAGAGGGGCGCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTG                                                                                                                                                                          <  1:261455/150‑1
   CGGAAAAGAGGGGCGCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGG                                                                                                                                                                         <  1:222580/150‑1
       AAAGAGGGGCGCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGC                                                                                                                                                                     <  2:725572/150‑1
        AAGAGGGGCGCGATTGTGCACGGAAAGGTTGGACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCG                                                                                                                                                                    >  2:742270/1‑150
        AAGAGGGGCGCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCG                                                                                                                                                                    <  2:1010502/150‑1
            GGGGCGCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCT                                                                                                                                                                <  1:742270/150‑1
              GGCGCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGAGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTG                                                                                                                                                              <  2:696307/150‑1
                CGCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCG                                                                                                                                                            <  2:960600/150‑1
                                                                       CACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCT                                                                                                     >  1:71406/1‑150
                                                                                    AAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGA                                                                                                                                                      >  2:1011144/1‑88
                                                                                    AAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGA                                                                                                                                                      <  1:1011144/88‑1
                                                                                               ATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGC                                                                             <  1:861619/150‑1
                                                                                                  GCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGAC                                                                          <  2:71406/150‑1
                                                                                                                                       CTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAG                                                                     <  1:440415/118‑1
                                                                                                                                       CTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAG                                                                     >  2:440415/1‑118
                                                                                                                                                       GGGAGCGGCCTTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAGGCCGCCCCACAGGCGCCCAGGCCGCTACATTCCAC                     <  2:1044119/150‑1
                                                                                                                                                           GCGGCCTTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAGGCCGCCCCACAGGCGCCCAGGCCGCTACATTCCACCGAT                 <  2:413887/150‑1
                                                                                                                                                            CGGCCTTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAGGCCGCCCCACAGGCGCCCAGGCCGCTACATTCCACCGATC                <  1:1079055/150‑1
                                                                                                                                                               CCTTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCCAGGCCGCTCCCACAGGCCGCCCCACAGGCGCCCAGGCCGCTACATTCCACCGATCGAC             >  2:586950/1‑150
                                                                                                                                                               CCTTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAGGCCGCCCCACAGGCGCCCAAGCCGCTACATTCCACCGATCGAC             >  2:474597/1‑150
                                                                                                                                                                 TTGCGTCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAGGCCGCCCCACAGGCGCCCAGGCCGCTACATTCCACCGATCGACAC           <  2:1059025/150‑1
                                                                                                                                                                 TTGCGCGGCGAACAGCGTGCGGAGCGCCCCTAGGATTGCAGCTTTGCCGCCGAAATTGCTGGGGCCGCTTTGCGGCCCCATCGCGACGCAAGGCCGCTCCCACAGGCCGCCCCACAGGCGCCCAGGCCGCTACATTCCACCCATCGACAC           >  2:312880/1‑150
                                                                                                                                                                      TCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAGGCCGCCCCACAGGCGCCCAAGCCGCTA                             >  2:170782/1‑127
                                                                                                                                                                      TCGCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAGGCCGCCCCACAGGCGCCCAAGCCGCTA                             <  1:170782/127‑1
                                                                                                                                                                        GCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGGCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAGGC                                                      >  2:110319/1‑100
                                                                                                                                                                        GCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAGGCCGCCCCACAGGCGCCCAGGCCGCTACATTCCACCGATCGACACCAGCAAT    <  1:426671/150‑1
                                                                                                                                                                        GCGAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAGGC                                                      <  1:110319/100‑1
                                                                                                                                                                          GAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAGGCCGCCCCACAGGCGCCCAGGCCGCTACATTCCACCGATCGACACCAGCAATGC  <  2:661624/150‑1
                                                                                                                                                                          GAAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAGGCCGCCCCACAGGCGCCCAGGCCGCTACATTCCACCGATCGACACCAGCAATGC  <  1:619569/150‑1
                                                                                                                                                                                                                                                                                                                                
AACCGGAAAAGAGGGGCGCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4079310‑4079481
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcggccttgcgtcgcgaAAAGGGTGCGGAGCGCCCCTACGATTGCAGCTTTGCCGCTGAAATTGCTGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAGGCCGCCCCACAGGCGCCCAGGCCGCTACATTCCACCGATCGACACCAGCAATGC  <  NC_002947/4079550‑4079403

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.