New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 407948129 (0.640)5 (0.140) 5/200 NT 15.5% intergenic (‑241/+143) sdaC/amaC serine:H+ symport permease/D‑lysine aminotransferase
?NC_002947 = 4079550 31 (0.850)intergenic (‑310/+74) sdaC/amaC serine:H+ symport permease/D‑lysine aminotransferase

ACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTT  >  NC_002947/4079337‑4079629
                                                                                                                                                |                                                                                                                                                    
aCGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAggg                                                                                                                                                 >  1:61427/1‑150 (MQ=255)
     aaGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCa                                                                                                                                            >  1:474597/1‑150 (MQ=255)
             aCTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGcc                                                                                                                                    >  2:843496/1‑150 (MQ=255)
                       accTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAAttt                                                                                                                          >  2:827134/2‑150 (MQ=255)
                        ccTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTc                                                                                                                         >  2:445042/1‑150 (MQ=255)
                         cTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCa                                                                                                                        >  2:1184317/1‑150 (MQ=255)
                                gaggagCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCaa                                                                                                                 >  1:1026567/1‑150 (MQ=255)
                                  ggagCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAg                                                                                                               <  1:827134/150‑1 (MQ=255)
                                            cACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgct                                                                                                     >  1:71406‑M1/1‑101 (MQ=255)
                                             aCTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTa                                                                                                    <  2:295185/150‑1 (MQ=255)
                                                tGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAggg                                                                                                 <  1:155785/150‑1 (MQ=255)
                                                 gTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAg                                                                                                                       <  2:500396/127‑1 (MQ=255)
                                                 gTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAg                                                                                                                       >  1:500396/1‑127 (MQ=255)
                                                         aaGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGA                                                                                                                                                      <  1:1011144‑M1/88‑1 (MQ=255)
                                                         aaGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGA                                                                                                                                                      >  2:1011144‑M1/1‑88 (MQ=255)
                                                          aGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCa                                                                                       <  2:61427/150‑1 (MQ=255)
                                                           gCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCAc                                                                                      <  1:1184317/150‑1 (MQ=255)
                                                                  gCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtc                                                                               <  2:661624‑M2/150‑3 (MQ=255)
                                                                  gCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtc                                                                               <  1:619569‑M2/150‑3 (MQ=255)
                                                                    aTTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgc                                                                             <  1:861619‑M1/150‑74 (MQ=255)
                                                                    aTTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgc                                                                             <  1:426671‑M2/150‑5 (MQ=255)
                                                                       gCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgac                                                                          <  2:71406‑M1/150‑77 (MQ=255)
                                                                           gtgtCGATGGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATGGGGCCGCAAAGCGGCCCCAGCAATTTCGGCGGCAAAGCTGCAATCCTAGGGGCGCTCCGCACGCTGTtcgccgcgcaa                                                                      >  2:312880‑M2/1‑139 (MQ=255)
                                                                           gtgtCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaa                                                                      <  2:1059025‑M2/150‑12 (MQ=255)
                                                                             gtCGATCGGTGGAATGTAGCGGCTTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaagg                                                                    >  2:474597‑M2/1‑137 (MQ=255)
                                                                             gtCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCa                                                                                                                        <  1:955119/98‑1 (MQ=255)
                                                                             gtCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCa                                                                                                                        >  2:955119/1‑98 (MQ=255)
                                                                             gtCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTGGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaagg                                                                    >  2:586950‑M2/1‑137 (MQ=255)
                                                                                gATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggccg                                                                 <  1:1079055‑M2/150‑17 (MQ=255)
                                                                                 aTCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggccgc                                                                <  2:413887‑M2/150‑18 (MQ=255)
                                                                                     gTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggccgctccc                                                            <  2:1044119‑M2/150‑22 (MQ=255)
                                                                                            gTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGt                                                     <  1:1044119/150‑1 (MQ=255)
                                                                                            gTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGt                                                     <  1:1059025/150‑1 (MQ=255)
                                                                                             tAGCGGCTTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgcga                                                                           >  2:170782‑M2/1‑121 (MQ=255)
                                                                                             tAGCGGCTTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgcga                                                                           <  1:170782‑M2/127‑7 (MQ=255)
                                                                                                cGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCaa                                                 <  1:517452/150‑1 (MQ=255)
                                                                                                     tGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACcgcg                                            <  2:1079055/150‑1 (MQ=255)
                                                                                                           ccTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCcac                                      >  2:642838/1‑150 (MQ=255)
                                                                                                            cTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGCTAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGGCGCTCCCACAAAGTCCAACCGCGCCCcaca                                     >  1:1140075/1‑150 (MQ=255)
                                                                                                            cTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgcaag                                                                     <  1:440415‑M1/118‑82 (MQ=255)
                                                                                                            cTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgcaag                                                                     >  2:440415‑M1/1‑37 (MQ=255)
                                                                                                              gtgGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACagg                                   >  1:1097184/1‑150 (MQ=255)
                                                                                                                      gcCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgc                                                                             <  1:110319‑M2/100‑5 (MQ=255)
                                                                                                                      gcCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGCCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgc                                                                             >  2:110319‑M2/1‑96 (MQ=255)
                                                                                                                        cTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCttt                                                                                 >  2:884000/1‑94 (MQ=255)
                                                                                                                        cTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCttt                                                                                 <  1:884000/94‑1 (MQ=255)
                                                                                                                            gggAGCGGCCTTGCGTCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccac                     <  2:1044119‑M1/150‑130 (MQ=255)
                                                                                                                            gggAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTg                     <  1:661624/150‑1 (MQ=255)
                                                                                                                              gAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGTTCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGc                   <  2:885030/150‑1 (MQ=255)
                                                                                                                                gCGGCCTTGCGTCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgat                 <  2:413887‑M1/150‑134 (MQ=255)
                                                                                                                                 cGGCCTTGCGTCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatc                <  1:1079055‑M1/150‑135 (MQ=255)
                                                                                                                                   gCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACACAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGtt              >  1:258746/1‑150 (MQ=255)
                                                                                                                                    ccTTGCGTCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgccaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatcgac             >  2:586950‑M1/1‑13 (MQ=255)
                                                                                                                                    ccTTGCGTCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaagccgctacattccaccgatcgac             >  2:474597‑M1/1‑13 (MQ=255)
                                                                                                                                    ccTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGATGGGCCGCAGTTGGCCCGTTg             <  2:426671/150‑1 (MQ=255)
                                                                                                                                    ccTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTg             >  1:624740/1‑150 (MQ=255)
                                                                                                                                     cTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggccgctcccacaggccgccccacag                                            <  1:440415‑M2/118‑38 (MQ=255)
                                                                                                                                     cTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggccgctcccacaggccgccccacag                                            >  2:440415‑M2/1‑81 (MQ=255)
                                                                                                                                      ttGCGTCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatcgacac           <  2:1059025‑M1/150‑140 (MQ=255)
                                                                                                                                      ttGCGCGGCGAacagcgtgcggagcgcccctaggattgcagctttgccgccgaaattgctggggccgctttgcggccccatcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccacccatcgacac           >  2:312880‑M1/1‑11 (MQ=255)
                                                                                                                                          gTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatcgacaccagc       <  2:71406‑M2/150‑75 (MQ=255)
                                                                                                                                           tCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaagccgcta                             >  2:170782‑M1/1‑6 (MQ=255)
                                                                                                                                           tCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaagccgcta                             <  1:170782‑M1/127‑122 (MQ=255)
                                                                                                                                             gcgAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctgggggcgctttgcggccctatcgcgacgcaaggccgctcccacaggc                                                      >  2:110319‑M1/1‑4 (MQ=255)
                                                                                                                                             gcgAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatcgacaccagcaat    <  1:426671‑M1/150‑147 (MQ=255)
                                                                                                                                             gcgAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgcaaggccgctcccacaggc                                                      <  1:110319‑M1/100‑97 (MQ=255)
                                                                                                                                             gcgATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatcgacaccagcaat    <  1:861619‑M2/150‑78 (MQ=255)
                                                                                                                                               gAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatcgacaccagcaatgc  <  2:661624‑M1/150‑149 (MQ=255)
                                                                                                                                               gAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatcgacaccagcaatgc  <  1:619569‑M1/150‑149 (MQ=255)
                                                                                                                                                |                                                                                                                                                    
ACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTT  >  NC_002947/4079337‑4079629

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.