| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4129658 | 43 (0.950) | 5 (0.120) | 4/234 | NT | 10.4% | coding (231/942 nt) | PP_3633 | ArgC‑like N‑acetyl‑gamma‑glutamyl‑phosphate reductase |
| ? | NC_002947 | = 4129681 | 46 (1.080) | coding (254/942 nt) | PP_3633 | ArgC‑like N‑acetyl‑gamma‑glutamyl‑phosphate reductase | |||||
AGCGATCTTCGCCTGCTGACCCTCCCCGAGGCCGAGCGCAAGGACCCGCAACGCCGCTGCGAAGCGATCAACAGTGCCGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4129506‑4129658‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcggTGCGCCGAGCTGGCGTCGATCACCCGCACCTGGGGGTTGTGGATTGCGGCCACGGCCTCGCGGGCGGCGTCGTCGGGCAGGCACAGCAGGGCGATGTCGGCACTGTTGATCGCTTCGCAGCGGCGTTGCGGGTCCTTGCGCTCG < NC_002947/4129681‑4129538 AGCGATCTTCGCCTGTTGACCCTCCCCGAGGCCGAGCGCAAGGACCCGCAACGACGCTACGAAGCAATCAACAGTTCCGTGATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTG < 1:85484/150‑1 GCGATCTTCGCCTGCTGACCCTCCCCGAGGCCGAGCGCAAGGACCCGCAACGCCGCTGCGAAGCGATCAACAGTGCCGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGC < 1:171227/150‑1 GATCTTCGCCTGCTGACCCTCCCCGAGGCCGAGCGCAAGGACCCGCAACGCCGCTGCGAAGCGATCAACAGTGCCGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGG < 1:838836/150‑1 CCTCCCCGAGGCCGAGCGCAAGGACCCGCAACGCCGCTGCGAAGCGATCAACAGTGCCGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGTGCGCCGAGCTGGCGTC > 2:168616/1‑150 GAGCGCAAGCACCCGCAACGCCGCTGCGAAGCGATCAACAGTGCCGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGTGCGCCGAGCTGGCGTCGATCACCCGCACC < 2:167183/150‑1 CGCAAGGACCCGCAACGCCGCTGCGAAGCGATCAACAGTGCCGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGTGCGCCGAGCTGGCGTCGATCACCCGCACCTGG < 1:168616/150‑1 GGACCCGCAACGCCGCTGCGAAGCGATCAACAGTGCCGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGTGCGCCGAGCTGGCGTCGATCACCCGCACCTGG > 1:1185339/1‑145 GGACCCGCAACGCCGCTGCGAAGCGATCAACAGTGCCGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGTGCGCCGAGCTGGCGTCGATCACCCGCACCTGG < 2:1185339/145‑1 GGTGCGGTGCGCCGAGCTGGCGTCGATCACCCGCACCTGGGGGTTGTGGATTGCGGCCACGGCCTCGCGGGCGGCGTCGTCGGGCAGGCACAGCAGGGCGATGTCGGCACTGTTGATCGCTTCGCAGCGGCGTTGCGGGTCCTTGCGCTC < 1:35752/150‑1 GTGCGGTGCGCCGAGCTGGCGTCGATCACCCGCACCTGGGGGTTGTGGATTGCGGCCACGGCCTCGCGGGCGGCGTCGTCGGGCAGGCACAGCAGGGCGATGTCGGCACTGTTGATCGCTTCGCAGCGGCGTTGCGGGTCCTTGCGCTCG < 2:1150166/150‑1 AGCGATCTTCGCCTGCTGACCCTCCCCGAGGCCGAGCGCAAGGACCCGCAACGCCGCTGCGAAGCGATCAACAGTGCCGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4129506‑4129658‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcggTGCGCCGAGCTGGCGTCGATCACCCGCACCTGGGGGTTGTGGATTGCGGCCACGGCCTCGCGGGCGGCGTCGTCGGGCAGGCACAGCAGGGCGATGTCGGCACTGTTGATCGCTTCGCAGCGGCGTTGCGGGTCCTTGCGCTCG < NC_002947/4129681‑4129538 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |