New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4363036 = | 28 (0.620) | 4 (0.090) | 4/242 | NT | 12.6% | coding (78/1011 nt) | adhP | alcohol dehydrogenase |
? | NC_002947 | 4363059 = | 28 (0.640) | coding (101/1011 nt) | adhP | alcohol dehydrogenase |
GCACACACCGCAGCACTGCATCTTCAGCAGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4363069‑4363036 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGGGTAGTACTGGGCCACGAAGGTATTGGCGTGGTTCAGGAAGTTGGC > NC_002947/4363059‑4363162 GCACACACCGCAGCACTGCATCTTCAGCAGCGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGG < 1:259672/93‑1 GCACACACCGCAGCACTGCATCTTCAGCAGCGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGG > 2:259672/1‑93 CACTGCATCTTCAGCAGCGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGC < 1:584628/59‑1 CACTGCATCTTCAGCAGCGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGC > 2:584628/1‑59 CTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGGGTAGTACTGGGCCACGAAGGTATTGGCGTGGTTCAGGAAGTTGGC < 1:1070196/106‑1 CTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGGGTAGTACTGGGCCACGAAGGTATTGGCGTGGTTCAGGAAGTTGGC > 2:1070196/1‑106 GCACACACCGCAGCACTGCATCTTCAGCAGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4363069‑4363036 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGGGTAGTACTGGGCCACGAAGGTATTGGCGTGGTTCAGGAAGTTGGC > NC_002947/4363059‑4363162 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |